KEGG   Xenopus laevis (African clawed frog): 444359
Entry
444359            CDS       T01010                                 
Symbol
snrnp48.L, snrnp48
Name
(RefSeq) small nuclear ribonucleoprotein, U11/U12 48KDa subunit L homeolog
  KO
K13156  U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    444359 (snrnp48.L)
Spliceosome [BR:xla03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    444359 (snrnp48.L)
SSDB
Motif
Pfam: zf-U11-48K
Other DBs
NCBI-GeneID: 444359
NCBI-ProteinID: NP_001085930
Xenbase: XB-GENE-5867851
UniProt: Q5XH46
LinkDB
Position
6L:94171782..94180860
AA seq 332 aa
MERGPCTLLQEMKDFTEQCQSRLSDLLQELGWTSEFSGGEQDAAVCPFDDNHRMPKSSLE
KHIATCRLRKLGYSKEEVQISDTQFYYEKAKLPSVVIDKELQFQIINKARDRVSTGNAAG
SYERSAYSCSPVEVPINHKYAICDLKPADRLAIYDYVLEQTRIQKPASQTDRSEADLFED
LAAKINQDDDQNGPKSHLEIMAEMRDYKRRRQSYRAKNVHITKKSYTEIIHDVINVHMEE
LSSHWRDENNDDARSSVSSSSVRRRPLQRSPSADSRDSGSHRDKQHSVRKRERSRSPHKH
SNREKEKDTKKKKARDVDRRHHSHKRRKHSED
NT seq 999 nt   +upstreamnt  +downstreamnt
atggagaggggtccgtgtactttgctgcaggaaatgaaagactttaccgagcagtgccag
agtcgcctgtctgatttgttgcaggaattaggatggacgtctgagttttctgggggtgag
caggatgcagcagtttgtccatttgatgataatcaccgaatgcctaaatcctccctggaa
aagcacattgctacatgcaggctacgaaagttgggatatagcaaggaagaggttcagatt
tctgacacacagttttactacgagaaagcgaaactaccgtcagttgttatagataaagag
ctacagtttcaaattatcaataaagctagggatcgtgtgtcaaccggcaatgcagctgga
tcatatgagagaagtgcatattcttgctctccagttgaagttcctataaatcacaagtat
gccatttgtgacctgaagcctgctgatcgccttgccatctatgactatgtcctggagcag
accaggattcagaaacctgcttcccagactgatcgttctgaagctgacctgtttgaagat
ttagctgccaaaataaaccaagatgatgaccagaatggacccaaatcccaccttgaaatc
atggctgaaatgagagactacaagcgacggcgccagtcttacagggcaaagaatgttcac
ataacaaagaagtcttacacagagattatccacgatgttataaatgtgcacatggaagaa
ctgagcagccattggcgtgatgagaataacgatgatgcaagatcctctgtttcttcttct
tctgttagaaggagaccattgcaaagatctccctcggcagattccagggactctggaagt
cacagagacaaacaacattctgtaagaaaaagggagcgaagcaggagcccacataaacat
tctaatcgggaaaaagaaaaggacaccaaaaagaaaaaagcgagggatgtagacagacga
caccacagtcataaaagaagaaagcacagcgaagactaa

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