Xenopus laevis (African clawed frog): 444834
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Entry
444834 CDS
T01010
Symbol
sec23b.L, sec23b
Name
(RefSeq) Sec23 homolog B, COPII coat complex component L homeolog
KO
K14006
protein transport protein SEC23
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
444834 (sec23b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
444834 (sec23b.L)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
444834 (sec23b.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Gelsolin
zf-Sec23_Sec24
Sec23_helical
APP_E2
Motif
Other DBs
NCBI-GeneID:
444834
NCBI-ProteinID:
NP_001086405
Xenbase:
XB-GENE-974670
UniProt:
Q6DJE0
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Position
5L:complement(38639776..38663226)
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AA seq
741 aa
AA seq
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MATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLGCLFTPLKERLDLPPVQYEPVL
CTRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPTYAGISEVNQPAELMPQFSTIEYI
VQRGPQTPLVFLYVVDTCLEEEDLQALKESLQMSLSLLPPDALVGLITFGRMVQVHELSC
DGISKSYVFRGTKDLTAKQIQDMLGLSKAAAPAQQGRPIQPQEQPFLSSRFLQPVHKIDM
NLTDLLGELQRDPWPVPQGKRPLRSTGVALSIAVGLLEGTLPNTGARIMLFTGGPPTQGA
GMVVGDELKTPIRSWHDIEKDNARFMKKATKHYETLANRSAANGHCIDIYACALDQTGLL
EMKCCSNLTGGQIVIGDSFNTSLFKQTFQRVFTKDLNGSFKMGFGANLDVKTSRELKISG
TIGPCVSLNVKGPCVSENELGVGGTSQWKICALDPTTTLAIYFEVVNQHNAPIPQGGRGA
VQFLTQYQHSSTQKRIRVTTIARNWADAQSQIQHIEAAFDQEAAAVLMARLGVYRAETEE
GPDVLRWLDRQLIRLFMFHLRRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPILY
SYSFYGPPEPVLLDSSSILADRILLMDTFFQIVIYLGETIAQWRNAGYHDMPEYENFKQL
LQAPLDDAQEILQSRFPMPRYINTEHGGSQARFLLSKVNPSQTHNNLYNWGQESGAPILT
DDVSLQVFMDHLKKLAVSTAS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctacctacttagagtttattcaacaaaacgaggagcgagatggtgttcgcttcagc
tggaatgtgtggccctccagccgactggaagccacacggatggttgtacctttgggctgc
ctttttactcctctgaaggaacgtcttgatctcccaccggttcagtatgagccagtgctc
tgcaccagaccaacttgcaaggcagtgcttaatccactgtgtcaggtggactacagagct
aaactgtgggcatgtaatttctgcttccagcgaaaccagttccctccaacatatgcagga
atatcagaagtgaatcagcctgcagaattaatgccacagttttccacaattgaatacata
gtgcagcgagggcctcaaactccattggtattcttatatgtggtggatacatgtctagag
gaggaagatctgcaagctctcaaggagtccttgcagatgtctcttagcctgctgccccct
gatgctttggttggactgatcacctttggcagaatggtgcaagtacatgaactgagctgc
gatgggatctctaagagctacgtctttagaggcacaaaagatctgactgctaaacaaata
caggatatgttgggactctcaaaggctgcagccccagcgcagcaaggaagaccaattcag
ccccaggaacagccctttttgtctagtcggttcctgcagccagttcataaaattgacatg
aatctaaccgatttgcttggggaattacaacgtgatccctggcctgtgcctcaagggaaa
aggcctcttcgatctactggtgtagctttgtctatagctgttggattattggaggggaca
cttccaaacaccggtgccagaataatgttgtttacaggtggacccccaacacaaggggct
ggcatggtagttggagatgaacttaagacgcccatccgatcttggcatgatattgagaaa
gacaatgcacgtttcatgaagaaagctactaagcactatgaaacattggcaaaccgcagt
gcagcaaatggtcactgcattgacatttatgcttgtgccttggatcagactggccttttg
gagatgaaatgctgttcaaacctcactggtggacaaattgtaattggagattcctttaac
acatccctttttaaacaaactttccagagagtgtttactaaagatctaaatggatcgttt
aaaatgggttttggggcaaatctagatgtcaagacatcaagagagttgaaaatttctggt
accattggaccctgtgtctcattaaatgtcaaaggcccttgtgtttctgaaaatgaactg
ggtgtcggaggaacaagccagtggaaaatttgtgcgttggatccaactactacgcttgcc
atttattttgaagtggtgaatcaacacaatgcacctattcctcaaggtggacgtggggca
gtacagtttcttacccagtaccagcattctagtacacagaaacgaatcagggtcaccacc
attgctagaaattgggcagatgctcagagccagattcaacacatcgaagcagcatttgat
caagaagcagcggcagtactgatggcccggcttggagtttacagagcagagactgaagag
ggtccagatgttctcagatggttagataggcagcttatccgactgttcatgttccatttg
agacgatcgcctttcttgcaagtcttcaacaacagtccagatgagtcctcatactatcgc
catcactttgccagacaagacttaacacagtcactgatcatgatccagccgatcctttat
tcttactctttctatggacctccagagcctgttctgctggacagcagtagcattttagcc
gaccgaattctgcttatggacaccttcttccaaattgtcatctaccttggtgagactatt
gcacagtggcgtaatgcaggttaccacgacatgcctgaatatgaaaacttcaagcaactt
ttgcaagctccattagatgatgctcaggaaatcttacagagcaggttcccaatgccgcgc
tacatcaacacagaacacggaggaagtcaagcaagattccttctttcgaaagtgaatcca
tctcagacacacaacaacctttacaactggggacaggaatcaggggccccaatcctaact
gatgacgtcagtttacaagtgttcatggatcatttgaagaaacttgctgtttctactgct
tcttaa
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