Xenopus laevis (African clawed frog): 445862
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Entry
445862 CDS
T01010
Symbol
clasp1.S, clasp1, clasp1-a, clasp1-b, clasp1b, mast1, Xorbit
Name
(RefSeq) CLIP-associating protein 1-B
KO
K16578
CLIP-associating protein 1/2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
445862 (clasp1.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
445862 (clasp1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
445862 (clasp1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
445862 (clasp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
HEAT_2
Cnd1
Adaptin_N
Sec7-like_HUS
Dopey_N
ParcG
MMS19_C
TTI1
TAN
Motif
Other DBs
NCBI-GeneID:
445862
NCBI-ProteinID:
NP_001128506
Xenbase:
XB-GENE-6049836
UniProt:
A1A5K2
A0A974H1E3
LinkDB
All DBs
Position
9_10S:48322143..48425899
Genome browser
AA seq
1456 aa
AA seq
DB search
MEQGMDYWLGQIQQKDVGKRLQVGPDLIEYLLDRQKSIDLEQDQTLLDRMVDGLATSWVN
SSNYKVALLGMDILSALVTRLQDRFRTQIGTVLPSLMDRLGDAKDSVRDQDQNLLIKIME
QASNPQYMWERMFSGFKHKNFRTREGVCLCLIATLNVYGANSLTLSKIVPHICNLLGDPN
SQVRDAAINCLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGTMILSTTDKN
FDDEDSVDGNRPSSASSSASSKAPQTARRGVSLGTGRRPGTSSAAPKTGGTAKEGAGALD
EEDFIRAFEDAPTVQIYSSRDLEESLNKIREILSDDKHDWEQRISALKKIRSLLLAGAAE
YDNFFQQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAVMPTVFNLV
PNSTKIMATSGVVTIRLIIRHTHVPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTH
SLERHVSVLAETIKKGIHDADSEARIVARKCYWGFHGHFSKEAEQLFHALESSYQKALQS
HLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTVSRATSKSTTGSLQRSRSDID
VNAAATSKTKAASGASTAPFSSVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADTRGR
SRAKVVSQSQPGSRSSSPGKLLGSSYGGIATGPQRVPQMPSEKRSKIPRSQGCSRETSPS
RTVLDRFGISQPGRIPSAMRVLSSSTDLEAAVADALLLGDSRNKMKPVRRRYEPYGMYSD
DDANSDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLVGLQNLLK
SQRLLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLL
KKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIES
LARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGA
LPKTFQDGATKLLHNHLKNSSNSSMGSPSNTIGRTPSRHSSSRASPLTSPTNCSHGGLSP
SMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQVDLNEPVRRDGKKESEMGSCDAGMAS
PASDLRGGTDMVEGGRMALDNKTSLLNTQPPRAFTGPRGREYNPYAYSDSINSYDKTALK
EAVFDDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALCELLKITREDNLAVWEE
HFKTILLLLLETLGDKDHAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKE
VVRAAEEAASTLAGSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQIL
PDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQ
TTNSNSSSSSDVSTHS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggaatggactactggctggggcagatacagcagaaagatgtgggcaagaga
ctccaggttggaccagacttgatagaatacctgttggatagacagaagtctatagacctg
gaacaggatcagactctgcttgatagaatggtcgatggacttgccacttcctgggtgaat
tctagtaattacaaggtggccttgttgggcatggacattctgtcggcactggttaccaga
ctgcaggatcgattcagaacacagattggcacagtgctgccaagtttaatggaccgatta
ggggatgccaaggactctgtgcgagaccaagaccagaacctcctgataaagataatggaa
caagcctccaacccacagtacatgtgggaacgcatgttttcgggattcaagcataagaat
ttccgtacgcgggaaggagtctgcctctgccttattgctaccctcaatgtgtatggagcc
aacagtctgacactcagtaagattgtaccacatatatgtaacctgctgggggatcctaat
agccaggtccgagatgctgcaataaattgcctcgtagagatctacagacacgtaggggaa
cgtgtccgagcagatctaagtaagaaagggctgccacaatcacgactgaatgtaattttc
accaaatttgatgaggtgcaaaaatcaggaaccatgatcctctccacaacagataaaaac
tttgatgatgaagattctgttgatggcaaccgaccctcatcggccagttcttccgcctct
tctaaagcccctcaaactgcccgaagaggggtaagcctagggactggccgcaggccaggg
acttctagtgctgcacccaagacaggaggaactgccaaagaaggagcgggagccctggat
gaggaggattttatcagagcgtttgaagatgctcccactgtccagatctattcaagccga
gacctagaagagtccttgaacaagattcgagaaatcctctctgatgacaagcatgactgg
gagcagaggatcagtgctctgaagaagatccgatctttgcttttggcgggggcagcagaa
tatgataatttcttccagcaactccgcctgctcgatggagcatttaaactctctgccaag
gacttgcgctctcaggttgtacgggaggcctgtatcaccctgggacacttatcctcagtt
ctggggaataaatttgaccatggtgcagaagcagtcatgccaacagtcttcaatctggtc
cctaacagtaccaaaatcatggccacctctggagttgtaaccatccggctaatcatacgt
cacacacacgtcccacggttgatccccatcatcaccagtaactgcacctccaagtctgtc
gccgttagaagacgctgctatgagtttttggatttgcttcttcaagaatggcaaactcac
tcactcgaaaggcatgtatctgtgttggcggagaccatcaaaaaggggattcatgatgcg
gattccgaagcgaggatcgtcgcaaggaagtgctactggggattccacggtcatttcagt
aaggaggcagagcagctgttccacgcattggagtcttcctaccagaaagccctgcagtcc
catctgaagaactctgacagtattgtctctttgccccagtctgaccgttcctcctccagt
tcccaggaaagcctcaaccgtccactctctgccaaaagaagccccacgggaagcactgtg
tctagagctacttccaaatccaccactgggtccctgcagcgatctcgtagtgacatcgat
gtgaacgcagcagccacttctaaaacgaaggcagcatctggagcctccactgccccattc
agttctgttgccgccctgccacctggatcctatgcgtcactgggtcgtattcgcactaga
aggcagagttccggcagcaccaccagcacggcctctaccccagcagacacccgtggacgt
agtcgagccaaagttgtgtcacagtcacagcccggaagccggtccagctcaccaggaaaa
ctcctgggaagtagctatggcgggatagcaactggcccacagagggtcccccagatgccc
tctgagaagagaagcaagattccccgaagccaggggtgcagcagggagaccagcccaagc
aggactgtcttagatcgttttgggatcagccaaccaggaagaatcccctcagcaatgcgt
gtgctgagttcaagcacagatctggaggcagctgtggcagatgctctgttgctgggagat
tccagaaataagatgaagccagttcggaggcgttatgagccatacggcatgtactctgat
gatgatgccaacagtgatgcatcaagcgcttgctcggagaggtcctatagctctaagaat
ggcggcatcccacactacctgcgccagacggaagatgtggctgaggtgctgaatcactgt
gccagctccaactggtctgagagaaaggaaggactcgttggactgcagaacctgctcaag
agtcagaggctgcttagccgggtggaactgaaaaggctgtgcgaaatcttcacccggatg
tttgctgatcctcacagcaagagagttttcagcatgttcctggagacccttgtggacttt
gttattattcacaaagacgacctgcaggactggctctttatcctcctgacccagctgctg
aagaaaatgggcgctgacctgctgggctctgtccaagccaaggtgcagaaggcactggat
gtgacaagggattccttcccgtttgaccagcagtttaacatcctcatgagattcatagtg
gatcagacccagactcccaatctcaaggtgaaagttgccatattgaagtatattgagtcc
ttggcccgacagatggacccaacagactttgtcaactccagtgagacgcgtctggctgtt
tccagaatcatcacttggacaactgagccaaagagttctgatgtcaggaaggcggcacag
gttgtcttaatctctctgtttgagctgaacaccccagagttcaccatgttactgggggct
ctacccaaaaccttccaggatggggccacaaaactcctgcacaaccacctcaagaactca
agcaacagtagcatgggatccccaagcaacaccattggcagaactccttccagacactcc
agcagccgagccagtccactaacatcgcccaccaactgttcccatggcggcctctctccc
agcatgctggattatgacactgaaaacctgaactctgatgaaatctatagctccctccga
ggggtgaccgaggccatcgagaagttcagcttccgcagccaagtagatctcaatgagcct
gtgagacgggacggcaaaaaggaaagtgaaatggggtcctgcgatgctggaatggcttct
ccagccagtgatctacgagggggcacagacatggtggaaggaggtagaatggcgcttgat
aacaagacttccctgctgaacactcagccgcctcgggcattcacaggaccccgtgggagg
gaatacaacccttacgcctattccgactccattaacagctacgataagactgcactaaag
gaagctgtgtttgatgatgacatggatcagctgcgtgacgtacccattgaccattcagac
ttggtggccgaccttctcaaagagctgtccaatcacaacgagcgggtggaggagaggaaa
ggtgccctttgtgagctgctgaagatcacgagagaagacaacttggccgtttgggaggaa
catttcaagaccattctactcctcctgttggaaacactgggtgataaagatcacgcaatt
cgcgccttggcattgagggtactgagagaaatcctgcgcaaccaaccggcccggtttaag
aattatgctgagctgaccataatgaagacactggaagcccataaggactctcataaagag
gtagtgagagctgcagaagaagcagcatcaactctggccgggtctatccaccctgagcag
tgcattaaggttctgtgccccatcatccagacagccgactaccccataaacctcgctgcc
attaaaatgcaaacaaaagtcattgagaggatttccaaggagtctctgcaccagatcctc
ccagatatcattccaggcttgttacagggctacgataatacagagagcagcgtccgcaag
gcaagtgtcttctgtctggtagccgtctactctgtgattggagaagagctgaaaccatac
cttgcgcaattgactggcagtaagatgaagctgctgaacctgtatataaagagagcacag
acaacaaacagtaacagcagctcctcatcggacgtctccacacacagttag
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integrated database retrieval system
