Xenopus laevis (African clawed frog): 447193
Help
Entry
447193 CDS
T01010
Symbol
shmt2.L, shmt2
Name
(RefSeq) serine hydroxymethyltransferase 2 (mitochondrial) L homeolog
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00260
Glycine, serine and threonine metabolism
xla00630
Glyoxylate and dicarboxylate metabolism
xla00670
One carbon pool by folate
xla01100
Metabolic pathways
xla01200
Carbon metabolism
xla01230
Biosynthesis of amino acids
xla01240
Biosynthesis of cofactors
Module
xla_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
447193 (shmt2.L)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
447193 (shmt2.L)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
447193 (shmt2.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
447193 (shmt2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
447193
NCBI-ProteinID:
NP_001087369
Xenbase:
XB-GENE-957481
UniProt:
Q6AXB3
A0A974DS03
LinkDB
All DBs
Position
2L:146985121..147012968
Genome browser
AA seq
496 aa
AA seq
DB search
MLTFSIRRLAQPLRRCCHVRSQHSQAWTQAGNEVWTGQESMAEGDPEMWDLVQKEKDRQC
RGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQQRALDAFD
LDPEKWGVNVQPYSGSPANFAAYTAVLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSI
YFESMPYKLNPATGLINYDQLEMTARLFRPKLIIAGTSAYARLIDYAKMRKVCDEVKAYL
LADMAHISGLVAAGVIPSPFQHADIVTSTTHKTLRGARSGLIFFRKGVKSVDKKTGKEIP
YNLEDKINFSVFPSIQGGPHNHAIAAVAVALKQASSPMFREYAVQVLKNAKSMAAALLSK
GYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGA
PALTSRNFKEADFEKVVDFIDEGIRIGLDVKRKTNKLQDFKNFLLEDQETVKRIGDLRKQ
VEQFARAFPMPGFDER
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgttttctatacggcgcttggcacagcccctgcggaggtgttgccatgttcga
agtcaacacagccaagcttggacacaggctggaaacgaagtatggactgggcaagaaagt
atggcagagggtgatcctgagatgtgggaccttgtacaaaaggagaaggacaggcagtgc
cgagggctggagttgattgcctcagagaatttctgtagccgggcagctttggaagccctt
ggttcctgcctcaacaacaagtattctgagggctacccagggaagaggtactatggtggt
gcagaggttgtggatcaaattgagttactttgccaacagcgagctttggatgcctttgac
ttggacccagaaaaatggggagttaatgtacagccatattcaggctccccagccaacttt
gcagcatacacagctgtcttacagccacacgatcgcatcatgggcctagaccttcctgat
ggtggacatctgactcatgggtacatgtctgatgtgaaacgcatttctgctacgtctata
tactttgaatcaatgccttataagttaaatccagcaacagggttaatcaattatgaccag
ctggagatgactgcgcgcctcttccgaccaaagcttatcattgctggaaccagtgcctat
gcacggctaattgactatgccaagatgagaaaggtctgtgatgaagtgaaagcctacctt
cttgctgatatggctcatatcagtggacttgtagcagctggtgtgatcccatctccattt
caacatgctgatattgtcacctccacaacacacaagactttgcgaggtgcaagatctggg
ttaatattcttccgaaaaggtgtaaaatctgtggacaagaaaactggaaaagaaatacct
tataacttggaagacaaaatcaacttttcagtctttccctcaatccaaggggggcctcac
aatcatgcaattgcagctgttgctgtggctttgaaacaggccagttctcctatgttccgt
gaatatgcagtacaagtcctaaagaacgccaaatccatggccgctgctctgctaagcaag
ggttacacgctggtgtcaggaggcacagataatcacctggttctagtagacctgagaccc
aagggtattgatggtgccagagcagagagggtgctggagcttgtatcaataacggcaaat
aagaacacgtgtccgggggacaagagtgcacttactccaggagggttgcgactaggtgcc
cctgcgctgacatctcggaatttcaaagaagctgactttgaaaaagtggttgatttcatt
gatgaaggtatccgcatcgggctggatgttaagcgcaaaacaaataaacttcaagacttc
aagaattttcttcttgaggaccaggaaaccgttaaacggataggggacctgcgtaagcaa
gtagagcagtttgcccgtgcttttcccatgcccggatttgatgagcgttaa
DBGET
integrated database retrieval system
