Xenopus laevis (African clawed frog): 495521
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Entry
495521 CDS
T01010
Symbol
colgalt1.S, colgalt1, colgalt1-b, glt25d1, glt25d1-b, glt25d1a
Name
(RefSeq) procollagen galactosyltransferase 1-B precursor
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla00514
Other types of O-glycan biosynthesis
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
495521 (colgalt1.S)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
495521 (colgalt1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
495521 (colgalt1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
495521 (colgalt1.S)
Glycosyltransferases [BR:
xla01003
]
O-Glycan biosynthesis
O-linked Gal type
495521 (colgalt1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
495521
NCBI-ProteinID:
NP_001088623
Xenbase:
XB-GENE-6253736
UniProt:
Q5U483
A0A974BRE9
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Position
3S:120926989..120954386
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AA seq
611 aa
AA seq
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MSQAGVERLLKGLQILVLVLRLSAGYFPEERWNPESPFRSPTVLIAVLARNSEGSLPEVL
GALDRLHYPKERISLWVATDHNFDNTSQILREWLINVQNQYHHVEWRPQEHPRWFRDEES
PKHWSHSRYEYVMKLRQAALTSAREMWADYIFFLDADNLLTNSETLNLLIAENKTVVAPM
LESRAAYSNFWCGMTTQGYYRRTPAYMPIRRRERQGCFPVPMVHSTFLIDLRKEASQQLD
FYPPHADYTWAFDDIIVFAFSCRQAEVQMFLCNKEIYGYLPVPLRSHSTLLDETDNFLHT
KLEAMVKGPQVHPSSFVTIPKKVPDKMSFDEVFLINLKHRQDRRERMKRTLYELQIDFKL
VDAVYGKMLNQSNVTEMGIKMLPGYKDPYHGRPLTRGEMGCFLSHYNIWKEISERNLEVS
AVLEDDLRFEIFFKRRLQTLLHDLEIAKLDWDLIYLGRKRMQVDEPEEPVPGVRNLVVSD
YSYWTLGYLISLRGARKLLNAEPLGKMLPVDEFLPVMYDKHPISDYSSHFSTRDLRAFSV
EPLLLYPTHYTGDKGYISDTETSVLWDNVTQPTDWDRAKSRKTHQQEKLRSEALNTPSMG
SPFDNTARDEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagccggtgtcgagcggctcctgaaggggctccagatattggtgctcgtgctg
cggctcagcgccgggtacttcccggaagaacgatggaacccggagtctccgttccgcagt
ccgaccgtcctgatcgccgtgttggccagaaactccgagggttcccttccagaggtgctg
ggagcgctggacaggctgcactacccgaaggagcggatctctttatgggttgccacagat
cataattttgacaatacgagtcagatcttgcgggaatggctgatcaatgtgcagaatcag
taccaccatgtggagtggagaccgcaggagcacccaaggtggttcagggacgaggaaagc
cccaagcactggtcccattctcggtacgagtacgtcatgaagctacggcaggcggcgcta
acctctgcccgagagatgtgggccgattacattttttttctggatgcagataacctccta
acaaactccgagactctgaatcttctcatagcagagaacaagactgtggtggcccccatg
ctggagtccagggcagcgtattctaatttctggtgtggcatgacaacccagggctattac
cggcgcactcccgcctacatgccaatccgccgtagagagcgccagggttgctttcccgtc
cccatggttcactctacctttctgatagaccttcgtaaggaggcttcccagcagctggac
ttctacccgcctcacgccgactacacatgggcattcgatgacatcatcgtatttgcattt
tcctgcaggcaagcagaagtacagatgtttctttgtaataaagagatctatggctatttg
ccagtccctctccgttctcacagcactctcttggatgagacggacaacttccttcacacc
aagctggaagccatggtgaagggcccgcaggttcatccatcaagctttgtaaccatacct
aaaaaagtcccagacaagatgtcttttgatgaggtcttcctcattaacctgaagcatcgg
caagacaggagggagcgtatgaagagaacactgtacgagctccagatagactttaagctg
gtggatgccgtgtatggaaagatgctaaatcaatccaatgtcaccgaaatgggcataaag
atgctccctggctacaaagacccgtaccatgggcgccctctgactcgcggagagatggga
tgttttctcagtcactacaacatctggaaggagatctccgaacgcaatctggaggtttcg
gcagtgttggaggacgaccttaggtttgagatcttctttaagcggcggctgcagacgctc
ctgcatgatcttgaaatagccaaactggactgggacctcatttacctgggcaggaagaga
atgcaggttgatgaaccagaagagcctgtgccaggggtccgtaatttggtggtatcggat
tattcctattggaccctcggatatctgatctccttgcgtggggcaagaaagctcttgaat
gccgaacctcttgggaagatgctgcctgtagacgagttcctgccagtcatgtatgacaag
caccccatctctgactattcctcgcatttctccacgcgagaccttcgggccttctcggtg
gagcctctccttctgtatcccacccactacactggagacaagggctacattagtgacaca
gagacctcggtactgtgggataatgtgacgcaacccactgactgggacagagcaaagtct
cgcaagacccatcaacaggaaaagctgcgcagcgaggcgctaaataccccctccatgggc
tccccttttgataacactgcccgggatgaattatga
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