Xiphophorus maculatus (southern platyfish): 102221660
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Entry
102221660 CDS
T02923
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102221660 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xma01007
]
102221660 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102221660 (farsb)
Enzymes [BR:
xma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
102221660 (farsb)
Amino acid related enzymes [BR:
xma01007
]
Aminoacyl-tRNA synthetase
Class II (U)
102221660 (farsb)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102221660 (farsb)
Prokaryotic type
102221660 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
EF1_GNE
B5
EF-1_beta_acid
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
102221660
NCBI-ProteinID:
XP_005805934
UniProt:
M4AYF6
LinkDB
All DBs
Position
18:complement(10219999..10232901)
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AA seq
847 aa
AA seq
DB search
MPTVGVKRDFLFKALGRTYTDEEFDELCFEFGLELDEITSEREIISKEQGDSKASDASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRLSPDSGEPQRLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKAPG
DICFRPLNQTKEYTATQLMSLYKTDSHLKHYLPIIEDKPVYPVIYDSNGIVLSMPPIING
DHSKISLKTKNVFIECTATDLTKGKIVLDMIVTMFSEYCAQPFTVEQAEVVYPDGKTCIY
PELAYRKEKLSGEFINKKVGIRESTERIAQLLTRMCLLSQPTGVSDEIEVEIPPTRPDVI
HACDIMEDAAIAYGFNKITRTTPSTYTIATQFPLNKLTELLRQDLAAAGFTEAFTFALCS
QEDTADKLGKKIAETRAIHISNPKTAEFQVARTTLLPGLLKTIAANKKMPLPLKLFEISD
VVLKDESKDVGARNSRRFCAIYYNKTPGFEVIHGLLDRTMQLLEVKAARGEGYHIQAADD
STFFPGRCAEIFARGTSVGRLGVLHPDVISRFDLTMPCSALEMDLEPFLGHTAEILLTHD
VPMQETFKHPFPAPSQSQPTLPSRLPSTKTVFGDLSSQAGLKALNDFLTDRSYIEGFTVS
QADAAVFDAIPSPPSQAFCHLRRWYCHIKSFQTERARLPSARSQFVLPPTSPASPNNTSE
DDMNLFGSDDDEESAEAARIREQRLSEYAAKKSKKPALVAKSSILLDVKPWDDETDMAKM
EECVRSVAMEGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEEAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggggttaaaagagactttctctttaaagctttgggcagaacatacact
gatgaggagtttgacgagttatgctttgagtttgggctggagttggatgaaattacctca
gaaagggagataatcagcaaggagcagggcgactctaaagcttcagacgcatccgatgtt
attctgtataagatcgacgtgccagctaaccgctacgacctgctgtgtctggaggggctt
gtccgtggtctacaggtcttcaagaataagctcgaggcgcctcgatacagacgcttgagt
ccagacagtggggagcctcagaggttgatcatcactaaagagacagcagcagtgcgaccc
catgccgtggcagcagtgttgaggaacatcactttcactcaggagcgctatgacagtttc
attgagctgcaggagaagctacatcagaacatctgcagaaagaggagcctggttgccatt
ggcacccatgacctggacaccatctcaggtccgttcacctacactgccaaagctcccgga
gacatctgcttcagaccgctaaaccagaccaaagagtacacggctactcagctcatgagc
ctctacaagacagacagtcacttgaaacattatctccctattattgaagacaagcctgtg
tatccagtcatctatgacagcaacggcattgtactgtcaatgcctcctataatcaacggg
gaccattcaaaaatcagtttaaagacaaagaacgtctttatcgagtgcacagcaaccgat
cttactaagggaaagatcgtgttggacatgatcgtgaccatgttcagcgagtattgtgct
cagcctttcacggtggagcaggctgaagtggtgtacccagatggaaagacctgcatatac
cccgaactggcttacaggaaggagaagctgtctggcgagttcatcaacaaaaaagttggc
attagggaatcaacggagagaattgctcagctcctgacccggatgtgcctcctctcccaa
cccactggcgtcagtgatgagattgaggtggagatcccccccacccgtccagacgtcatc
cacgcctgtgacatcatggaggacgccgccatcgcctacgggtttaacaaaatcacccgc
acgacgccaagcacctacaccatagccacccagtttcctctcaataaactgacagagctg
ctgagacaagacctggcagctgctggattcacagaggctttcacctttgctctgtgttct
caagaagatacagcagacaagcttggaaaaaagatcgctgagactcgagctattcacatt
tccaaccccaagactgcagagttccaggtggcacgcaccactttacttcctggcctgctg
aaaaccatagctgccaacaagaagatgccccttcctctcaaactatttgagatatctgat
gtggtgctgaaggatgagagcaaagatgttggggcaaggaacagtcggcgtttctgtgcc
atttattacaacaagactccaggctttgaggtgatccacggcctgctggaccgaaccatg
cagctgctggaggtgaaagcagctcgtggagagggataccacatccaggctgcagacgat
tccaccttcttcccgggtcgctgtgctgagatctttgcccgtgggacgagtgtagggcgt
ctcggagtccttcaccccgacgtcataagccgcttcgatctgaccatgccctgctctgct
ttggagatggatctcgaacctttccttggccacactgctgaaatcctcctcacacatgac
gttcccatgcaggaaaccttcaagcacccgtttccagctcccagccaatcccagccaact
ctgccatctcgcctgccttcaactaaaacggtgtttggcgatttgagctcacaggcaggc
ctcaaggcgcttaatgatttcctgacagacagaagctacatagagggtttcacggtgtcc
caagctgacgccgcagtgttcgatgccatcccttctccgccctcgcaggctttctgccac
ctccggcgctggtactgccacatcaagtccttccagacggagagagcgcggctcccgtca
gccaggagtcagtttgttctcccacccacttcgcctgcctccccaaacaacacaagcgaa
gatgacatgaaccttttcggttccgacgacgacgaagagagcgcagaggcagctcggatc
cgagagcagcgcctgtccgagtatgccgccaagaagtctaagaagccggcgcttgtcgcc
aagtcctccatcctcctcgatgttaagccgtgggatgacgagacggacatggccaagatg
gaagagtgcgtccgtagcgtcgctatggagggcctgctgtgggggcagtccaagctggtg
ccagtgggctacgggatcaagaagctccagatagggtgcgtagtggaggacgataaagtg
ggcacggatctgctggaggaagccatcactgctttcgaggaatacgttcaatctgtggat
gtggctgccttcaataagatctga
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