KEGG   Xiphophorus maculatus (southern platyfish): 102228822
Entry
102228822         CDS       T02923                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102228822 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xma01009]
    102228822 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xma03400]
    102228822 (pnkp)
Enzymes [BR:xma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102228822 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102228822 (pnkp)
Protein phosphatases and associated proteins [BR:xma01009]
 HAD phosphatases
  Other HAD phosphatases
   102228822 (pnkp)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102228822 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6
Other DBs
NCBI-GeneID: 102228822
NCBI-ProteinID: XP_005804628
Ensembl: ENSXMAG00000002791
UniProt: M3ZKR3
LinkDB
Position
18:11885419..11892093
AA seq 590 aa
MSWALVGPSGIRIPLEDGRAVILGRGPDTGVADKNCSRHQVKVVACYAEQDVVVTQLGPN
PSFVNGEKLGRGQSGKLTHGGTLYLVNQRHPFTLDVSLSSTCSMTQRNLKVSDKTKGGRN
RTEAESSPSPKRSIKDFFSVSPSKASKRQLNTERDQSEVKRQKLDEQDEEERLSEEKLKE
LQEFAEKNMTEEKKDTQSSPSSSPAKVCVKSSWQQTGTLMFYTAAGVKASKKIAGFDIDG
CIITTKSGKVFPTAPDDWKILYPEIQPRLASLLKKGYKVVFFTNQLGIARGKLIPEVFKS
KVEDILTTLQLPVQVFVASGPGVYRKPVMGMWNHLCEKANDGVAVDKTQSFYVGDAAGRP
ENWAPGKKKKDFSCSDRLFALNIGLQFYTPEEYFLGWKSAPYSLPDFDPRKLDSSCRLFD
PPSASLICTKTEVIVAVGYPAAGKSSFFHTHIVPKGYVYVNRDTLGSWQNCVSACERALK
EGRSVAVDNTNPDRESRKRYLDVAKAAGVSCRCFFFTATLEQAKHNNRFREMAPSNSKHA
KVSDMVFHSYKKNFVAPNLSEGFSEILQIHFVPHFQDRQSETLFRQFSEG
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcgtgggcgctggttggaccttctgggatccggattccactggaggacggacgggct
gtgattctgggccggggtccggacactggggtggccgacaagaactgctccaggcaccag
gtgaaggtggtggcttgttatgcagagcaggatgtggttgttactcagcttgggccaaat
cctagtttcgtaaatggtgagaagctgggtcggggtcagtcaggtaaacttacccacgga
ggcaccctgtacctggtcaaccagcgccacccatttacactggacgtctctctgagctca
acttgcagcatgacacagaggaacctgaaagtctcagataagactaaaggaggtagaaac
aggacagaggctgaatccagtccgtctccgaaacgcagtattaaggacttcttttccgtc
tctccctctaaggcttctaaaaggcagctgaacacagagagggaccagtctgaggtgaag
cgacagaaattagatgagcaggatgaggaggagagactctctgaggaaaagctaaaggag
ctgcaggagtttgcagaaaagaacatgacagaggagaaaaaagacacccaatcttccccg
tcttcatctccagcaaaggtgtgcgtgaagagcagctggcagcagacaggaaccctcatg
ttttacacagctgcaggagtgaaagcgagcaaaaagattgctgggtttgatattgatgga
tgcattatcaccaccaaatctggaaaagtctttcccaccgcacctgatgactggaagatt
ctgtaccctgagattcagcccaggctggccagcttgctcaaaaaaggctataaggttgtt
ttcttcaccaaccagctggggatcgctaggggcaaactgataccagaggtgttcaagtct
aaagtggaggatatcctcaccacgctgcagctgcctgtgcaggtgtttgtcgccagcggc
cctggtgtctacaggaaacccgtgatgggaatgtggaatcacctgtgtgagaaagctaat
gatggggtggctgtcgacaagacccagagtttttatgtaggagatgctgcaggaaggccg
gagaactgggctccgggcaagaagaagaaggatttctcctgcagtgacagattgtttgcg
ctgaacattgggcttcagttctacacaccagaagaatactttttaggatggaagagcgcc
ccctacagccttcctgactttgatcctcggaagctcgactctagctgcagattattcgac
ccgccgtccgcctcactcatctgcaccaagacagaagttattgttgccgtgggttaccct
gcagctggtaaatcctccttcttccacacccacattgttccaaagggctacgtctacgtc
aacagggacacgctcggctcctggcagaactgcgtgtcggcatgtgagcgagctctgaag
gagggccgcagcgtcgccgtggacaacaccaacccagaccgagagtctcgcaaacgatac
ttggacgtggccaaggcagcaggagtgtcctgtcgctgtttcttcttcactgccacctta
gagcaagccaagcacaataacagattccgtgagatggctccatctaacagcaaacatgct
aaggtcagcgacatggttttccacagctacaagaaaaattttgtggctccaaatctctcc
gagggtttctctgagatccttcaaatccactttgttccacacttccaggacagacagtct
gaaactttgttcaggcagttctctgaggggtga

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