Xiphophorus maculatus (southern platyfish): 102233380
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Entry
102233380 CDS
T02923
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xma03016
]
102233380 (tsen54)
Transfer RNA biogenesis [BR:
xma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102233380 (tsen54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
102233380
NCBI-ProteinID:
XP_005816605
Ensembl:
ENSXMAG00000018818
UniProt:
M4AWL0
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All DBs
Position
16:1788060..1797102
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AA seq
496 aa
AA seq
DB search
MADQNKPESADNFFNEILSPCELFAARSRSHKIPARGQKDFYPDDSEEQKQRLQQRLDEH
WSLISEERVERLGNLVKAVWSPSERIVELQTPAGKFWQTMGFSAEGKQFLLPEEALYLME
CGNLQVFHQDLPLSIQDGYEAFLSSDSVSLQQYQVFGHLKRLGYVVHRFDPSSEPSPYAR
QLNLPRSRDRGGRQLKRKRSPSPAPTSSKTAAASQAEEMEEEDKLPESHLVASAAPQTSS
SGAAGEVQARTWWPAEVPERQAGQRSAPGSQRWDFSSICFPDLGSAGRLAPLDASLLPGG
VTPGVCDVAPWMRRINLRKVKMSPKEEERERRQRRRDVNKDKEVQRCRNWAEYHKLLERR
QAKRQGRPAHLWSGEVQPLHDPTRPISTAELLEKISVIKSTDLLEGAARLKGSEEWRICF
NVYQPDSVADFKKSNPGKPYARMCVCSFDGPVPDLRVIKQLSFQSGDVPVVYAAVDHGDI
SFYTFKDFQLPRDIYP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaaaacaagccagaaagcgcagataacttctttaatgaaatattaagtcca
tgtgagctgtttgcggcccgctccaggagccacaagatcccggcccgagggcagaaggat
ttctatccggatgactcggaggagcaaaagcagcggctgcagcagcgcctggatgaacac
tggagtctcatttcagaggagcgggttgagaggctaggaaacctggtgaaagccgtctgg
agtcccagtgagcggattgtggagcttcagactcctgctggcaaattttggcagacgatg
ggtttttctgcagaagggaagcagttcctcctccctgaagaggcgctctacctgatggag
tgtggcaacctgcaggtgttccatcaggacctgccgctgtccatccaggacggctacgag
gcgttcctgtcctcagactctgtgagtctgcagcagtatcaggtgttcggtcatctgaag
cgcctcggatatgtggtgcacaggtttgatcccagctccgagccgtcgccctacgcccgg
cagctgaacctgcctcggtcccgggaccgcggggggaggcagctgaagaggaaacgcagc
cccagcccggcgcccacgtccagtaaaacagcagcagcgtctcaggctgaggaaatggag
gaggaagataaactacctgagtcccacctggtggcctcagcggcgcctcagacttcctcc
tccggcgcggcaggtgaagttcaggcccggacctggtggccggcggaggttcccgagcgg
caggcgggtcaaaggtcagcccccggttctcagcgctgggacttcagctccatctgtttc
cctgacctgggctccgccggccgcctggcccctctggacgcctcgttgcttcccggcggc
gtgacgcctggcgtgtgcgacgtcgccccctggatgcggaggataaacctgcggaaagtg
aaaatgtctccgaaggaggaggagagggagagacggcagcggcggcgggatgtgaacaaa
gacaaagaggtccagaggtgcagaaactgggcggagtaccacaagctgctggagcggcgg
caggcgaagcggcaaggccgacccgctcacttatggagcggggaagttcagcctctacac
gacccgactcggcccatctccaccgctgagcttctggagaaaatcagcgtgattaaatca
actgacctgctggagggagcagccaggttaaaaggttcggaggaatggaggatttgtttc
aatgtttaccagccggattcggtggctgacttcaaaaagagcaacccgggcaagccgtac
gcccgcatgtgcgtctgcagttttgacggtcctgttcctgatctgcgagtcatcaagcag
ctttcgtttcagagtggcgacgttcccgtcgtttacgccgccgtggatcacggagacatt
tccttctacaccttcaaggacttccagctgcccagggacatctacccctga
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