Xanthomonas oryzae pv. oryzae MAFF 311018: XOO2736
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Entry
XOO2736 CDS
T00360
Symbol
XOO2736
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom03410
Base excision repair
xom03430
Mismatch repair
xom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO2736 (XOO2736)
03430 Mismatch repair
XOO2736 (XOO2736)
03440 Homologous recombination
XOO2736 (XOO2736)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xom03400
]
XOO2736 (XOO2736)
DNA repair and recombination proteins [BR:
xom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
XOO2736 (XOO2736)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XOO2736 (XOO2736)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
XOO2736 (XOO2736)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BAE69491
LinkDB
All DBs
Position
complement(3088324..3090063)
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AA seq
579 aa
AA seq
DB search
MTSSPRIVRRPSGQAGSWPDTMLPLLRRIYAARGVTDTQGAQPRLGQLLSPELLHNSDVA
AALLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
LVDELATLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLA
EDTFPSKTLAGVGVMFYVLLALRKVLRARGAFAECAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGRGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
GIELLLCEDWSQARAIAGTLEEINAERRAVQQLMTDDAEQAVTKVVLDADGALPLAACLF
DTEWHPGVIGLVASKLKDRLHRPVIALAPVEPGSSQLRGSARSIPGLHIRDVLAAVDARH
PGLIQTFGGHAMAAGLSIHRTALATFEQAFQAQVMAMVDASLLHAELHSDGELAAHELDH
VHAEALRMAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCAGRAEPLNAIHFNGWR
GSEPARLVRLAYRLVADDYRGGTAVQLIVEHCEPAAVTR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagtccgcggatcgtccggcgcccttccgggcaggccggcagttggcccgat
accatgctgccgctgctgcgccgcatctatgccgcgcgcggtgtcaccgatacgcaaggc
gcgcagccgcggctgggccagttgttgtcgccggagctgctgcataacagcgacgtggcc
gccgcgctactggccgatgcgatcgcccagcaacggcgcatcctggtagtgggcgatttc
gattgcgatggcgccaccgcctgcgcagtcggtgtgcgcggcctgcgcatgctcggtgcg
ctggatgtacatcacgctgtgcccaatcgcatggtgcacggctatggcctgtcgcctgcc
ttggttgacgaactggcgacattacagccggatgtgctggtcactgtcgatcacggtatc
gcctgtcacgccggtgtcgccgcagccaaggcgcgcggttggacagtgctggtcaccgac
caccatctgccgggcgaggtgttgccgccggccgatgcgatcgtcgacccgaacctggcc
gaagacacgttccccagcaagacgctggccggggtcggggtgatgttttacgtgttgctg
gcgctgcgaaaagtgttgcgcgcacgcggcgcctttgccgagtgcgctgagccggatttg
tcggtattgctggatctggtcgcagtcggcaccgtcgccgatctggtgccgctggatacc
aataatcgtgcgctggtgtcggctggtttgcgtcgcctgcgcgagggcaggggctgcatc
ggtttgcgcgccttgatcgatgccagcggtcgcgatgtggcgcggctgagcgccagcgat
atcggatttgcgctcggaccgcgtctcaatgcggccggtcggctcgaggacatggcgctg
ggcatcgaactgttgctctgcgaagactggagccaggcgcgcgcgatcgccggcacgctg
gaagagatcaacgccgagcgccgcgcggtgcagcagttgatgaccgacgatgccgagcaa
gccgtcaccaaggtagtgctggatgccgatggcgcattgccgcttgccgcatgcctgttc
gataccgaatggcatccgggcgtgatcggtctggtggcatccaaactcaaggaccgcctg
catcgtccggtgatcgcgctggcaccggtcgagccgggcagcagccagttgcgcggttcg
gcgcgttcgattcccggcctgcatatccgcgatgtgctggcggcggtggacgcgcgccat
cccgggctgatccagacgttcggtggccatgcgatggcggccgggttgagcatccatcgc
acggccttagctacgttcgagcaggcattccaggcacaggtcatggcaatggtggacgcc
tcgctgctgcacgccgaattgcacagcgacggcgaattggccgcgcacgaactcgatcac
gtgcatgccgaagcgctgcgtatggccggaccgtgggggcagggttttcccgagccgttg
ttcgatggtcagttcgaggtgttgcagcatcgcgtgctcaaggagcgccacctcaaactg
acgctgcgttgcgccggacgcgccgagcctctcaatgccatccatttcaacggctggcgc
ggcagcgaacccgcgcgcttggtgcggctggcgtatcggctggtcgccgacgactatcgc
ggcggcacggcggtgcaattgatcgtcgagcattgcgagcccgcggcagtcacgcgttga
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