Xanthomonas oryzae pv. oryzae PXO99A: PXO_02865
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Entry
PXO_02865 CDS
T00763
Name
(GenBank) ECF sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xop03021
]
PXO_02865
Transcription machinery [BR:
xop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PXO_02865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Xre-like-HTH
GerE
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACD61350
UniProt:
A0A0K0GQD5
LinkDB
All DBs
Position
complement(4939223..4939738)
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AA seq
171 aa
AA seq
DB search
MDALDDDQLRAMLPALRRFARSLSGDPASADDLVQATLERALRRWRTRHTADALQPWLFA
ILYRQFLDGQRRVARWQRVVGLFAPQQPSQSASAEQVHDGRAMLARLALLPPEQRALLLL
VSVEGFSDRQVADTLGIPISTVISRLSRARERLRAVNEGHVNHAPALRILK
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggatgctctggacgatgaccaactgcgcgccatgctgccggcgctgcgccgcttcgcg
cgctcgctgagtggcgaccccgccagcgccgacgatctggtgcaagccacactcgagcgt
gcgctgcggcggtggcgcacacggcataccgccgacgccctgcagccgtggttgttcgcc
attttgtaccggcagtttctggatgggcagcgccgtgtcgcgcgctggcagcgggtggtg
ggtctgttcgccccacaacagcccagccaatccgcatccgccgaacaggtgcacgacggt
cgcgccatgttggcccgtctggcgttgttgccacccgagcagcgcgccttgttgctcttg
gtcagcgtggagggtttcagtgatcgccaggtggcagacacgctcggcatcccgattagc
acggtgatctcgcgcctgtcgcgtgcgcgcgaacgcttgcgcgcggtcaacgaaggtcac
gtgaaccacgcacctgcattgaggatcctgaaatga
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