Xanthomonas oryzae pv. oryzae PXO99A: PXO_03719
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Entry
PXO_03719 CDS
T00763
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXO_03719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xop03021
]
PXO_03719
03019 Messenger RNA biogenesis [BR:
xop03019
]
PXO_03719
Transcription machinery [BR:
xop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PXO_03719
Messenger RNA biogenesis [BR:
xop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PXO_03719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
Spore_III_AA
OB_RNB
AAA_22
TFIIA
Motif
Other DBs
NCBI-ProteinID:
ACD57146
UniProt:
A0A0K0GGG3
LinkDB
All DBs
Position
complement(510491..512380)
Genome browser
AA seq
629 aa
AA seq
DB search
MSDHPSSDTGSSVDAPVEKRVRKPRVSKTAVTDEDGGAQQPNLPLPASPAPEAPRAPQAP
SRAADPAPTQTSRDGAHAGPAPSANHGGDTHGESREGGQSQQQRFNQAQQQQNQNQSQSQ
GQGQQQAQAQAQGQNQNAGQNQQGQGGQGQGQNQQGQNQQGNRRDRFRNRRDRGPRDRFG
NEGGGMPSSDGSNEPFIARPHPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARA
RKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRF
NLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEASKGKVLFENLTPLFPRRRFRLER
GDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQVATAITTNHPEVHMIVLLI
DERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITR
LARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTVIATALVETGSKMDE
VIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHP
MDEIAAMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatcatccttcctccgataccgggagcagcgtcgacgctcccgtcgagaagcgc
gtgcgcaagccgcgcgtgagcaagaccgccgtcaccgatgaagacggtggcgcacagcag
cccaatctgcccttgcccgccagccccgcacccgaagcaccccgtgccccgcaggcaccg
tcgcgcgctgccgacccggcaccgacgcagacgtcccgcgatggcgcacacgccggtccg
gcgcccagcgccaaccacggtggcgacacccacggcgagtcccgcgagggcggccagtcg
cagcagcagcgcttcaaccaggcgcagcaacagcagaaccagaatcagtctcaaagccag
gggcaaggccagcagcaggctcaagcccaggcacaaggccagaaccagaacgccggccag
aaccagcaaggtcagggcggacagggtcaaggtcagaatcagcaaggccagaaccagcag
ggcaatcgacgcgaccggttccgcaaccgccgcgaccgcggcccgcgtgatcgtttcggt
aacgaaggcggcggcatgccttcgtccgatggcagcaacgagccattcatcgcgcgtccg
catccggccgtgccggaaggcttcccggtctattcgctgagcgatctcaagcggatgccg
gcgcagaagctgctggatatcgccgatcagctcaatatccaggaaggcgtggcgcgtgcg
cgcaagcaggacgtgatcttcgccctgctcaaggtgctcacccgtcatggcgaaggcgtt
gccgccgatggcgtgctggaaatcctgccggacggcttcggtttcctgcgtgctgcggaa
gccagctacctggccggcccggacgatacctatatttcgcccagccagatccgccgcttc
aatctgcgcaccggcgaccatctgtccggccgcatccgcttcccgaaggacggcgaacgc
tatttcgcgctgtcgatcgtcgacaccatcaacggtgagccgctggaagcgagcaagggc
aaagtgctgttcgagaacctgaccccgctgttcccgcgtcgccgcttccgtctggagcgt
ggcgatggctccaccgaggacatcaccggccgcatcctggatctgatggcgccgcagggt
aagggtcagcgtgcgctgatcgtctctccgcccaaggccggtaagacgatgatgatgcag
caggtggccacggccatcaccaccaatcaccccgaagtgcacatgatcgtgctgctcatc
gacgagcgcccggaagaagtgaccgaaatgcagcgcaccgtgcgcggcgaagtcatctcc
tccacgttcgacgagccggctgcgcgccacgtgcaggtcgccgagatggtgatcgagcgg
gccaagcgcctggtcgagcacaagaaggacgtggtgatcctgctggactccatcacccgt
ctggcgcgcgcctacaacaacgtggtgcccagctccggcaaggtgctcaccggtggtgtg
gacgccaatgccctgcaccgcccgaaacgcttcttcggtgcggcgcggaacgtggaagaa
ggcggctcgctgaccgtcatcgcgacggcgctggtggaaaccggcagcaagatggacgag
gtgatctacgaagagttcaagggcaccggcaacagcgaagtgcatctgaaccgtcgcatc
accgaaaagcgtgtgtacccggcaatcgacatcaaccgttcgggcacgcgccgcgaagac
ctgctgatcgagccggagctgctgcagaagatctggatcctgcgcaagctgctgcacccg
atggacgaaatcgccgcgatggaattcctgctggacaagatgaagaccaccaagtccaac
gacgagttcttcagttcgatgaagcgctga
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