KEGG   Xanthomonas oryzae pv. oryzicola BLS256: XOC_3469
Entry
XOC_3469          CDS       T01873                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
xor  Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XOC_3469 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xor03400]
    XOC_3469 (uvrA)
DNA repair and recombination proteins [BR:xor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XOC_3469 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      XOC_3469 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_23 AAA_16 RsgA_GTPase nSTAND1 AAA_25 AAA_21 nSTAND3 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AEQ97562
UniProt: G7TDN4
LinkDB
Position
3570908..3573874
AA seq 988 aa
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLTQDQEQRYMLLAPVIRDRKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHPFEGILPNLERRYRETESPAVREELTKYVSQQPCPACDGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEICAQGPLQDILKSPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
ESRARGYSPGRFSFNVRGGRCEACEGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVSGTPEDVAAHKASYTGQFLAKMLPSVKARQTRPAAMANKPDA
RPPRKVKPEKVGKVATSATKKTAKKKAS
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaaaaacatcgac
ctcgacctgccccgcgacaaattgatcgtgatcaccggcctgtccggctcgggcaagtcg
tcgttggcgttcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcacgccagttcctgagcgtgatggaaaagccggacctggatcatatcgaaggc
ctgtcccctgccatctcgatcgaacagaaatccacctcgcacaacccgcgttccaccgtc
ggcacgattaccgaaatctacgactacctgcgcctgctctacgcgcgcgtgggccagccg
cgctgcccggaccatggcttcccgctggaagcgcagaccgtcagccagatggtcgaccac
atgctcacccaggatcaggagcagcgttacatgctgctggccccggtgatccgcgaccgc
aagggcgagcatgcgcaagtgttcgaacaactgcgcgcgcagggtttcgtgcgcgtgcgc
gtggacggcgagctgtacgaaatcgatgcggtgccgccgttggcgctgcgccagaaacac
accatcgaggcggtgatcgaccgcttccgtccgcgcgaagacatcaagcagcgcctggcg
gaaagtttcgaaaccgcgctcaagctgggcgaaggcatggtggcggtgcaatcgttggac
gacccggcggccgcaccgcacctgttttcgtccaagtacagctgcccggtctgcgattac
tcgctgccggagttggaaccgcgactgttttcgttcaacgcacccgtgggtgcctgcccg
agttgcgatggcttgggcgtggccgagttcttcgacccggatcgtgtggtggtgcatccc
gagctgtcgctttccgctggcgcggtgcgcggctgggatcgacgcaatgcctattatttc
cagctgattgcctcgctggccaagcactacaagttcgatgtggatgcggtgtggaacaca
ctgccggccaaggtgcgccaggcggtgctgttcggcagcggcgatgaggtgatcagcttc
acctacttcaccgacgcgggcgggcgcaccacacgcaagcacccctttgaaggcatcctg
ccgaatctggaacgccgctaccgcgagaccgaatcgccggcggtgcgcgaagagctgacc
aagtacgtcagccagcagccctgcccggcctgcgacggcacgcgcttgaatcgcgctgcg
cgcaatgtgttcgtggccgatcgcccgctgccggaactggtggtactgccggtcaacgag
gcgttgagctttttccgtggcttgtcgctgccgggttggcgcggcgagattgcggccaag
atcgtcaaggagatcggcgagcggctgggcttcctggtcgatgtgggcctggactacctc
accctggagcgtaaggccgacaccttgtccggcggcgaagcgcaacgcattcgcttggcc
agccagatcggcgccggcctggtcggggtgatgtatgtgctggacgagccgtcgatcggc
ctgcatcagcgcgataacgaacgcctgctcggcacgctgacgcggctgcgcgacctgggt
aacaccgtgatcgtggtcgagcatgacgaagacgcgatccgcctggccgaccatgtgctg
gatatcggtcccggtgccggcgtgcatggcggcgaaatctgcgcgcaaggcccgctgcag
gacattctgaaatcgccgcgctcgctgaccggccaatatctgtcgggcaagcgccgcatc
gagattcccaagcagcgccacaagcccaacccgaagatgatgctgcatctgcgcggagca
accggcaacaacctcaagaacgtcgacctggacattccggccgggctgctgacctgcatc
accggcgtgtccggttcgggcaaatcgacgctgatcaacgataccttgttcacgctggcg
gccaacgagatcaacggcgcgtcgcacaccgtggcaccgcatcgcgaagtcgaaaatctg
gacctgttcgacaaggtcgtggatatcgaccagtcgccgatcggacgcacgccgcgctcc
aacccggcgacctacaccggcatgttcacgccgttgcgcgagctgtttgcgcaggtacca
gagtcgcgtgcacgcggttattcgccaggccgtttcagcttcaacgtgcgtggcggccgc
tgcgaggcctgcgagggcgacggcatgatcaaggtggagatgcacttcctgcccgacgtc
tacgtgccttgcgatgtctgccacggcaagcgctataaccgcgaaacgctggaaatccgc
tacaagggtttcaacatcagcgacgtgctgcagatgaccgtggaagatgcgctgcgcctg
ttcgagccagtgccgtcgatcgcgcgcaagctggaaacgctggtcgatgtgggactgagc
tacatcaagctgggccagagcgcgaccacgctgtccggcggtgaagcgcagcgcgtcaag
ctgtccaaggaactgtcgcgtcgcgataccgggcgcaccttgtacatcctggacgaaccg
accaccggcctgcacttccacgatatcgaagccttgctcggcgtgttgcacaagctgcgc
gacgaaggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggatcgtggatctgggtccggagggtggccatcgcggcggcaccatcctggtctccggt
acgccggaagatgtggctgcacacaaggcgtcctacaccgggcagttcctggccaagatg
ttgccgtcggtaaaagcgcgccagacgcgtccggcggcaatggccaacaagcccgatgcg
cgccctccgcgcaaggtcaaaccggagaaggtgggcaaggtcgccacatccgccaccaag
aagactgcaaagaagaaggcaagctga

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