Xanthomonas perforans: BJD13_00410
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Entry
BJD13_00410 CDS
T04778
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03420
Nucleotide excision repair
xpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJD13_00410
03430 Mismatch repair
BJD13_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_00410
Enzymes [BR:
xpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD13_00410
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD13_00410
MMR (mismatch excision repair)
Other MMR factors
BJD13_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APO97690
UniProt:
A0A1L5QZ65
LinkDB
All DBs
Position
pLH3.1:complement(87948..90260)
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AA seq
770 aa
AA seq
DB search
MSRRFTDEQIAVANHVTGHALVSAVAGAGKTTTLVERCRRLIATGIPESQILCLQYNKEA
QLDFSSRLTRRMGTSVIPHVKTYHAFCLAMWKQLEQQGHVGRTLQPKDSASAEDAMMRQA
LKDQAGKGVYVSQEQFEMLNSLKTLTKSCFDTPGTVYDRTDMPYEARTLIVGAYIRFENE
RLRRRLRFFDDQIYDTAVTLRGNPELWSLFRGRYQQIQVDEFQDISEVQMSILEGITGPD
TTVVVVGDADQAIYSWRGSKVAYIVHEFAARFTPCTRFAMSRTFRFGDELALFANHIVVN
NKERDDKISIAEEGNPNTLVELTYPVKGRNAFIINLLQERMANGSLSDAAMLCRNYSHSV
PLQMEMLMSGIPFFVYGREATLYNPEIGCLVGAMAMAADHWPFPTRSIPRFIQAMMVAPT
VFVSNAVTQMLTVNAMEVFEDQGSQAVGKGMLQAVKQIASIVTQHEMERLKTGLPMLKDR
ASFMEMLCAGGMRSLRPGQVIDTYIQYTNLIDSLLKHSRTREDGEEKVRNVQAMRAAAEG
FETLTAFLDELGPMAAHEKDKPPKHPHVRIQSVHSSKGAEFPLVILPSWNAGVVPANSPL
DAEEERRLAYVAVTRAKHHLVIQHAEDPMLTGWIEQYEDFPPANDGIRRASPYLFEGELG
ISMRVAEAVRDGVQDCITLRSPRVAQRYIEAKGMAGLIRIETLPHLAALSAGRPLTDISA
LAPGAQIWSRGRGTCEVIGRVGTSPAFHIRLADGSTAYEVLTEGGDWMVL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagccgacgattcacggacgaacagattgccgtagcaaaccacgtcaccgggcacgca
ctggtgtctgcggttgccggcgccgggaagaccaccaccttggtggagcgctgccggcgg
ctgatcgccaccggcattcctgaaagccagattctctgcctgcagtacaacaaggaagcc
cagcttgatttcagcagccgcctgaccaggcgcatgggcacttccgtcatcccccacgtc
aagacgtaccatgcgttctgcttggcaatgtggaagcagcttgagcagcagggccatgtc
ggcaggacccttcagccaaaggattcagcctcggctgaagacgcgatgatgcggcaagcc
ctgaaagaccaagcgggcaagggcgtctacgtctcccaggagcagttcgagatgctgaac
tcgctcaagactctgactaagagctgctttgacacacccggtactgtttacgatcgcacc
gacatgccatacgaggcccgtacgttgattgtgggtgcgtatatcaggttcgagaatgag
cgtctccgcaggcgcctgcgtttcttcgatgaccaaatctacgacactgccgtgacgttg
cgcggtaaccctgagctgtggagcctgttccgcggacgctaccagcaaatccaggtggac
gagttccaggacatctcagaagttcagatgagcatcctcgaaggaatcacaggtccggac
acgaccgtggtggtggtcggcgatgccgatcaggcgatctactcttggcgcggcagcaag
gttgcttacatcgtgcacgaattcgccgcgcgttttactccgtgcactcgcttcgctatg
tcacgaaccttccgattcggtgacgaattggcgctgttcgccaatcatatcgtggtcaac
aacaaagagcgcgacgacaagatcagtattgctgaggaaggcaatcccaacacgctggtc
gaactgacatacccggtgaaggggcgcaacgccttcatcatcaacttgttgcaggagcgc
atggccaacggttcgctgagcgatgccgccatgttgtgccgcaactatagtcattcggtc
cctctgcagatggagatgctgatgtccggcatccccttcttcgtctatggccgtgaagca
acgctctacaatcctgagattggctgcttggtgggcgccatggcaatggccgccgaccat
tggcctttccctacgcgaagcattccgcggttcattcaggccatgatggtcgctcctacg
gtgtttgtgtcgaatgccgtgacccagatgctcaccgtcaacgcgatggaggtcttcgaa
gatcaaggctcgcaggcagtggggaagggcatgctgcaggccgtgaagcaaattgcttcg
atcgtcacgcagcacgaaatggagcgcttgaaaacgggcctgccaatgctgaaggaccgg
gcaagcttcatggagatgctctgtgccggtggcatgcggtcattgcgccctggccaagtg
atcgacacctacatccagtacaccaacctgatcgactctctgctcaagcactcacgcact
cgcgaagatggcgaggagaaggtccggaatgtacaggcgatgcgagctgccgctgagggc
ttcgagacgctgaccgcgttcttggatgaactgggaccaatggccgctcacgaaaaggac
aagccgcccaagcatccacacgtgcgcattcaatcagtccattcaagcaagggtgccgag
ttcccactggttatccttcccagctggaacgccggcgtcgttccagctaactcgcccctg
gacgcggaggaggagcgccggctcgcctacgttgccgtgacccgtgccaagcaccacctg
gtgatccagcacgcagaggatccgatgctcaccggctggatcgagcaatacgaggacttt
ccccccgccaacgacggcattcgccgcgccagtccctacctgtttgagggcgagcttggg
atctcgatgcgtgtagccgaggcggtgcgcgacggtgtgcaggactgcatcaccctccga
agcccgcgtgtcgcccaacgctacatcgaggcaaaggggatggcaggcctgattcgcatc
gaaactcttcctcacctggcggccctcagcgcaggtaggccactcaccgacatttccgcc
cttgccccgggcgctcaaatctggagccgcggccgaggcacctgcgaagtgatcggtcgc
gtggggacatctcctgcgttccacatccgactggccgatggcagcacggcgtacgaagtg
cttaccgagggtggcgactggatggtgctttaa
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