Xenorhabdus poinarii: XPG1_3385
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Entry
XPG1_3385 CDS
T03805
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XPG1_3385 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpo03019
]
XPG1_3385 (pnp)
03016 Transfer RNA biogenesis [BR:
xpo03016
]
XPG1_3385 (pnp)
Enzymes [BR:
xpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XPG1_3385 (pnp)
Messenger RNA biogenesis [BR:
xpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XPG1_3385 (pnp)
Transfer RNA biogenesis [BR:
xpo03016
]
Prokaryotic type
tRNA degradation factors
XPG1_3385 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
KH_2
aRib
SLS1_KH2
Cas_Csn2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
CDG23021
UniProt:
A0A068R7V9
LinkDB
All DBs
Position
complement(3324271..3326397)
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AA seq
708 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTVVGQKKVKSGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEVQIIATVVSV
NPQVNPDIVAMIGASAALALSGIPFNGPIGAARVGYINDQYVLNPTSDELKHSRLDLVVA
GTENAVLMVESEAELLTEEQMLGAVVFGHEQQQIVIDSINALVAEAGKEKWDWSPEPINQ
PLHDRVAELAESRLGDAYRITEKQERYAQVDIIKEEITAIILAEFAEKGVELEETEILDV
LSALEKNVVRGRVLRGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVAATL
GTERDAQVIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMP
NINEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFV
VLSDILGDEDHLGDMDFKVAGSRDGVSALQMDIKIEGITREIMQIALNQAKGARLHILNV
MEQAIQSPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVK
IAATDGDKARHAIRRIEEITAEVEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIAD
KRVEKVTDYLQVGQEVPVKVLEIDRQGRVRLSMKEAVTTAAEQDLSVE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgattgttcgtaaattccagtatggtcaacacacggtgaccatcgaaact
ggcatgatggctcgccaggcaacggcagccgttatggttaatatggatgacacagcggta
tttgtcaccgttgtcggtcagaaaaaagtcaaatcaggtcaggatttcttcccgctgacc
gttaactatcaggagcgtacttacgctgcgggccgtattccgggcagtttcttccgtcgt
gaaggacgtccgggagaaggtgaaacattagttgctcgtcttatcgaccgccctctgcgc
ccgctgttcccggaaggtttcctgaatgaagttcaaatcatcgcgacggtcgtttctgtt
aacccgcaagtcaatcctgatatcgttgctatgattggcgcttctgctgcactggcgttg
tcgggtatcccgttcaatggcccaattggtgctgcgcgtgttggttatatcaatgatcag
tacgtactgaacccaaccagcgatgaactgaaacacagccgcctggatctggtcgttgca
ggtacggaaaatgcggtactgatggtggaatctgaagcggagctgctgactgaagaacaa
atgttgggtgccgttgtgtttggtcacgagcaacaacagattgtgattgatagtattaat
gcattggttgcagaagccggtaaagagaagtgggattggtcaccagagccgattaatcag
ccgttgcacgatcgtgttgccgaactggcagaaagccgtctgggtgatgcataccgcatt
actgagaagcaggaacgttacgctcaggttgatatcatcaaagaagaaatcacggcaatc
atcctggctgagtttgcggaaaaaggcgttgaactggaagaaacagaaattcttgacgtt
ctgtctgctctggagaaaaatgttgttcgcggtcgtgtcctacgtggtgagcctcgtatt
gacggtcgtgagaaagacatggttcgcgctctggacgtgcgtaccggtgtactgccacgt
actcacggctcctctttgttcacccgtggtgaaactcaggcgctggtagcggcgacactg
ggtacagaacgtgatgctcaggtgattgatgaactgatgggtgagcgtacagatcgcttc
ctgttccattataacttccctccatactctgtcggcgaaacaggcatggtcggttcacca
aaacgtcgtgaaattggtcacggtcgtttggcgaagcgtggtgtgttggctgtgatgcca
aatatcaacgaattcccgtatactgtgcgtgttgtgtctgaaatcactgagtcgaatggt
tcttcttccatggcttctgtttgtggtgcttcactagcactgatggatgcaggtgtgcca
attaaggcggctgttgccggtattgccatgggtctggtcaaagaaggggagaactttgtt
gttctgtccgacattctgggtgatgaagatcatctgggcgatatggactttaaagttgcg
ggtagccgtgatggtgtcagcgcattgcaaatggacatcaaaatcgaaggtattactcgt
gaaatcatgcagatcgcgttgaatcaggcgaaaggtgcccgtttacacatcctgaatgtg
atggaacaggcaatccaaagcccacgcaatgacatttctgaatttgccccacgtatccac
acgatcaagatcaacccggacaagatcaaagacgtgattggtaaaggtggctctgtgatc
cgcgcattgacagaagaaacagggaccaccattgaaattgaagatgatggtacagtgaag
attgcggcaacggatggtgataaagcacgtcatgctatccgtcgtatcgaagaaatcacc
gctgaagtcgaagttggccgtatttatgcgggtaaggttactcgtattgttgattttggc
gcttttgttgctatcggtggtggtaaagaaggattggttcatatttctcagatcgcagac
aaacgtgtagagaaagtgactgattatctgcaagtcggtcaggaagttccggtgaaggta
ttggaaattgatcgtcaaggtcgtgtccgcttgagcatgaaagaagcggtgacgacggct
gctgaacaggacttatccgtagaataa
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