Xenopus tropicalis (tropical clawed frog): 100124961
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Entry
100124961 CDS
T01011
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100124961 (tsen54)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
100124961 (tsen54)
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GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
THAP4_heme-bd
Motif
Other DBs
NCBI-GeneID:
100124961
NCBI-ProteinID:
NP_001096368
Xenbase:
XB-GENE-969117
UniProt:
A4II78
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All DBs
Position
10:44547278..44559170
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AA seq
229 aa
AA seq
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MLSPEELLAARSREKSIPQRSHGQKDFLPDGSEAQNEKLRLCRAEQWELLKEERVERLGS
LVKGIWRPKEDLVELTSPAGKFWQTMGFTHQGKQCLLPEEAVYLLECGAVQLFYHDSLLS
VLDQISVMERSFLLDDYESWAQSYRKAESQISFNVYQADGASEFKKSRPGKPYTRMCVRS
FSDQVPSLGTVKSLGYQSKDVPLIFALVDNGEVAFYSFKDFELPVDVYP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcccagaggaactgcttgccgccaggagccgtgagaagagcatccctcagcgc
tcccatgggcaaaaggactttctgcccgacggctccgaggctcagaacgagaagctgcgg
ctgtgccgcgccgagcaatgggagctgctaaaagaggagcgtgtggagcgattgggcagt
ctggtgaaaggcatatggagaccaaaggaagatttggtggaactgacatcccctgcgggc
aagttctggcagacaatgggttttacacaccaggggaagcaatgccttttgccggaagaa
gcagtgtacctgttggaatgtggtgctgtccagctattttaccacgattcactattatct
gtcctggaccagatcagtgtgatggaacggtcattcctattggatgattatgagagctgg
gcacagagctataggaaagccgagtcgcagattagctttaatgtgtatcaggccgacgga
gcctccgagttcaagaaatccagaccagggaagccatatacacggatgtgtgtgcgcagt
ttttctgatcaggtgccctcccttgggacggtgaagtcgctgggctaccagagcaaggac
gtcccgctcatatttgccctcgtagacaatggagaagttgccttttactccttcaaggac
tttgagctcccggtggacgtgtacccctga
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