Xenopus tropicalis (tropical clawed frog): 100170461
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Entry
100170461 CDS
T01011
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100170461 (cbll1)
04131 Membrane trafficking [BR:
xtr04131
]
100170461 (cbll1)
04121 Ubiquitin system [BR:
xtr04121
]
100170461 (cbll1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100170461 (cbll1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100170461 (cbll1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100170461 (cbll1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100170461 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
100170461
NCBI-ProteinID:
NP_001123714
Xenbase:
XB-GENE-6458353
UniProt:
B3DL63
LinkDB
All DBs
Position
3:complement(76283360..76294478)
Genome browser
AA seq
500 aa
AA seq
DB search
MDHNDNDLQGTNSMGSLSGLDVRRRIPIKLISKHPNKSKPPPRPQRNMNRMPTKPQPGFD
YNEEERYENKGGDMFNNQRRFPAHVFWDFKLNLIGEKEDTPIHFCDKCGLPIKIYGRMIP
CKHVFCYDCALMHEKKADKLCPGTLVEESTDTFKRMSCNDPVQRIEQCARGSLFMCSIVQ
GCKRTYLSQRDLQAHINHRHMRATKPTARPQPEPIHPPLAPPPAEIPDRFIMPPDKHHLS
HMPPKQHILMPPPPMQHVPHEHFSQQHDDIRPSPAEISLAPPPPRSVNQDAFRISTRQHS
NLITVPIQDDSNSGARETPQAPGPTLHHPEYPGQPVVAHPHHIMPPQQHYAPPPPPPPPI
SHPMQHPPQAAGTPHMVYSQGPPPPMTTAPPPITPPPGHIIAQIPPYMNHPPPGPPPPQH
GGPPVNAPPPHHYNPSSLPQFNEDLGTLSPPFTQPGGMSPGMWPAPRGPPPPPRMQGPPS
QAPIPGPHHPDQARYRPYYQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggaccataatgataatgatctacaaggcactaacagtatggggtccctgagtggcctg
gatgtccgtcgacgaataccaataaagctcatctcaaaacatccaaacaaaagtaaacca
cctcctcggccccaaagaaacatgaacagaatgccaacaaagcctcagccaggttttgat
tataatgaagaagagcggtatgagaataaaggaggtgacatgtttaataatcagaggaga
tttcctgctcacgtcttttgggactttaagcttaatctcattggagaaaaagaagacact
cctattcatttttgtgacaaatgtggcctgcctatcaaaatatatgggcggatgattcca
tgtaagcatgttttctgctatgactgtgctttaatgcatgagaaaaaggcagataaactg
tgtccaggaacacttgttgaagaaagtactgacacctttaagcgtatgagttgcaatgat
cccgttcaacgcattgagcagtgtgcacgtggctctctcttcatgtgtagcattgtgcaa
ggttgcaagagaacatatttatctcaaagagatctgcaggcacacattaaccaccgtcac
atgagagctaccaagccaactgcccgacctcagcctgagccaatccatcctcctttggcc
ccacccccagcagaaatcccagatcgctttataatgcccccagataagcatcatctaagt
catatgcctccaaaacaacatatattgatgccacctcccccaatgcaacatgttcctcat
gagcatttcagtcaacaacatgatgatattcggccctctccagcagaaatttccttagcc
ccgcctccaccccgctctgttaatcaggatgctttcaggatatctactagacagcatagc
aacttaatcacagtgcctattcaggatgattccaattctggtgccagagaaactcctcag
gcacctggtcctactctacatcatccagagtatccaggccaaccagtggtagctcatcct
caccatataatgcctccacagcagcactatgctccaccccctccaccaccccctccaatc
agtcatccaatgcaacaccctcctcaggcagctgggacacctcacatggtttacagccaa
ggtcctccaccaccaatgacaactgctccaccaccaataacacccccgccgggacatata
attgctcaaatcccaccatacatgaatcatcctcctccaggacctccgccaccacaacat
ggtggtccaccagttaatgctcctcctcctcatcattataatcctagttctttgcctcag
ttcaatgaagatctaggaactctaagccctcccttcacacaacctgggggaatgagccct
gggatgtggcctgctccaagaggaccaccgccacccccccgaatgcaagggcctccttct
caagcccctattccaggacctcatcatccagatcaggccagatacaggccgtattatcaa
tga
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