Xenopus tropicalis (tropical clawed frog): 100170551
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Entry
100170551 CDS
T01011
Symbol
srrm2
Name
(RefSeq) serine/arginine repetitive matrix protein 2
KO
K13172
serine/arginine repetitive matrix protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100170551 (srrm2)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100170551 (srrm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cwf21
Motif
Other DBs
NCBI-GeneID:
100170551
NCBI-ProteinID:
NP_001123800
Xenbase:
XB-GENE-5909454
UniProt:
B3DLV3
A0A8J0QCZ0
LinkDB
All DBs
Position
9:12489817..12515830
Genome browser
AA seq
2720 aa
AA seq
DB search
MYNGIGLPTPRGSGTNGYVQRNLSSVRHKKDRTDYKSEEELKKLENLLVKKPNQDILDHE
RKRKVELKCLELEEMMEEQGYSEAEIQEKVATFRLMLQEKDLTQSKEEEKQKANISETHQ
MAEANEKKNERLREAFGISDSYVDGSSFDPNRRAANAAAKQQEQQKQYSLIEDSGSSRSP
SPTKHKKKKKKKDRGRSSSRSPSHKDKKAKSRKHRSDSNSKKRKHRSPSASPKQRDVSSS
SRDETSRSRSRSSPPPRSKSDRAKPSSAAKESPERKRSVSPKRNRRSDRGRSPAEKGYKD
KVSRKELDQRDRSLSTSPKRRTEKEEVRELDKKARTLEKKDSRSEKKSSRPQAREDSPSS
SKVSKKKGRQESPQGHERFSKEKGVERISKAVSPETRRSPVGKGVSAKVSRRERSSSRNK
NSPQKYKESSPRYDKYSGSRRSPVASSKKRSPSVRSSSRSSSSSSATSESVKSSQLRRKK
DEGRGLTHSKENKTTRASLGARDGKPERSVSPIKEAKSKVSPSRRNTHNSISRKRSVSTS
PPRGVKSKTPPKKHRSPSNTPPRRARSKTPLRKARSPPYSPPKRTRSPQRKAKSPSDSPR
KGRGPAVSSPSRNRSRTPQRWARSVSQTPPIHHKERDRSSQGYGKRRSPQRRLDTSREMH
KRDSYKQTSKSRANSRSRSPVGHAKSSIQSPQRKARSRSKSPYTKQRSRSRTPTQRESSF
SMSLNQRKRSRSRSEQTRKKSRSATPRKRGRSRSTSVQQRKHSPSVSPNDSRSRSRSPMK
ETKSRSKIVSRHSRSRSQSPLINKSRSRTPKRKERSRSATKSYSKITQTKRTSPNVREVT
KSRKKSSSRSLSPQQQTFSRRSLSPKKHSSSRDNQKKVDSRSPSPKKSTSRTERAKLDSS
RQGYSSSPELRVRNKKLSRSPEQTKTYRTSVAKQSLQKESYRRSRSRSPATRKPHDKYKE
NSSLPSKKISSRDGTSSGAPLGRAVSPSPEHKERVQHRVLDTKSRESSRQSRDDFSRSSA
KVKESQSDRMLAQKERPRVSPHGHSGSSSEREIKSKTPPKKGASGTLVGHKSKETFQYKD
KSGSSSESKSRLKSPQHKHKSSELVDKTKHYQRKARASSSSSSHSENDSSRSRSRNRSGS
SSDRLRKAKPLQVRSSSGASSKEKSKSQSSQKVSSRSSSEHETRLEKEAKLVKHMVYTRS
SSDDESNSKNHQTKQRFEESLGSPSKPRPPKHSDVAMSSSERKSRPIKHRTSSASSSERP
LKAKVPAERQPIRARKSRSSSGSSSDPQSDSRVMQQKKSVPSYSKSRPIQSKASAVTRQT
RSRPPQRKNSSGSSSERHPSSRALHRSSSSGSHSDHVKTRRTQHRSSSESSSEQELNQSR
RRSSTSPLQHDKKSRLSHRSSSESVEREHKSRPPPHRSSSESSSGQDSESRLSEPKDFSR
SSLDQKDRSRQPRSKDRDQSPEHRTPQEKRVSRSPESDGRHRTPAQPVSPKSPQSKAGTE
RLKREKTRRNGKSESSSEGEESSKAPPHRTQFGSPLQTLRSSTDALIRRSKSPALTTKSD
PQQTSLSTGSPLQIHWKTASPLSPKDTSTNRHKTGIHSSNVGTESFTAFADESLGHSNAT
EAEDQFSLYAGLVPPRETDKSKSSPRENVINVDKHSTVQAGLCPAINGSETKLDLPLLTE
SQQSDSDLKAPSSHPSIEEATSRTEYVLSEMTSESQLNELSPGNKESQKHPSKRGKSGSL
CSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSEDEEENSSKKQKQNIVMSPPSKRLKT
TVSQSASSPSPKARTLENLDCDKSMSSASNTPDRAGKNSICSPEQKNDDAVQLQESISLE
CELKSPTLSGTNICTEQRSLGSPVPFGDKLAQKKRLPIEKKMNDSPRPEDCHKEYQATIQ
DTTPAKFHERDFGASPKSSSHIAAPNDEGRARLERSISRSPKRSFKATLSPSKSPSLVTS
KRADSCHSQSRTPSPDKSVKKESPLQKRSTPTRKGSKSPSADRKTESNSDSSSEDSSSDS
SSESGHSSSEGESKRVRLDASPRKDTIQDPPPIRRIASPVQSKSSVPLKHEPVKDVLRKS
RSVSKSPVREKDRSSLAGRESPRQKRRSLSQSPSRKGTSRTPPRHKARTPPRAFRSRSRS
RTDRRFRRERSRSSPRRYPSRSPSWQERRRWGRRRSPSPPRRGRSRSNTRAERTWRSRRG
RSGSSPWRGRSRSLSRHEASRYPRRGRSRSSPRRRSRSPRRRDKQTSYYRRERSSSSRRR
RSRTPQRRSRSPAKRARSRSPDRNKNSQSSRAAGLPSDGHSPAVQEKSHGTDERPVSEKS
RLSQKSDLSPVRTESPACKSRSASPSNSTSPHKSGIVVSTKLKSPSPPLLEKHTDKVEGS
PDTKQSGYTKKDIAPNKRDSGILLPSSKGSPAQTEHVLDECSRSPPRLLRAPAGSETTAA
SKSGEDQSDVIFQDQKRESKESPKDEALTLTESPACTMMANVENRKERIASPPLTSVGET
VASPSLTTKSRRQSSSSDSSSSSSSSSDSSPKKPSVDSGNVPAVDRVPSPMTAEPPKAAE
PPVPLERKRSSRSRSSSASSSSSSSSSSSSSSSNSDSSNSSSSSSSSSSSSSSSSSNKAS
SKKAASPVTRRSRSPRKPIDSLRDSRSLSYSPEERRRQPSPPPPRRRERDSGRNQESPER
KRRKDSPNSRYSHKRTSRSP
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatggaatcggactccccaccccaaggggcagtggaaccaatggctacgtccaa
cgcaacctgtcctctgtcagacacaagaaggacaggaccgattacaagtccgaggaggaa
ctgaagaagctggaaaacctcctggtgaagaaaccaaaccaggatatcttagatcacgag
aggaaaagaaaggtggagctaaaatgtttggaactggaggagatgatggaggagcaaggg
tacagcgaagctgagatccaagagaaagtggccacattcagactgatgctgcaagagaaa
gatctgacgcaaagcaaagaagaggagaagcagaaagccaatatttcagagacgcatcaa
atggccgaagcaaacgagaagaagaatgagcggctacgtgaggctttcgggatcagtgac
agctatgtggacgggagcagtttcgaccccaatcgcagagctgccaatgcagcagccaaa
cagcaggagcagcagaagcagtatagtctgattgaagattctggcagttctcgctcccct
tctcccaccaaacacaagaaaaagaagaaaaagaaagatcgtggacggtcctcaagtcgc
tctcccagccacaaggacaagaaagccaagtcccgtaagcacagatctgactccaactcc
aagaagcggaagcacagatctcctagtgcctccccaaagcagagagacgtttcctcctct
tcacgagatgaaacatcacgcagcagatcgagaagcagcccaccaccgagaagcaaatcc
gatcgtgccaagccgtcaagcgcggcaaaggagagcccagaaaggaaaagatccgtctct
ccgaaaagaaatcggagaagcgacagaggccgaagcccagcggaaaaaggctataaagat
aaagtatcaagaaaagagctggatcagagagaccgttctctttctacatctcctaaaaga
cgtacagaaaaagaggaggtgcgagagcttgataagaaggcgagaactctggaaaagaag
gactctagatctgaaaaaaaatcatcacgtccacaagctcgtgaagattcacccagttcc
agcaaggtgtccaaaaagaagggtcgacaggagagtccacaagggcatgaacgcttctcc
aaggaaaaaggtgtagaaaggatatctaaagcagtttctccagagaccagaaggtcccca
gttgggaaaggtgtgtctgcaaaagtgtcaaggagggaaagaagttcttctcgaaataaa
aactcgccacagaagtacaaggagtcctctccaagatatgacaaatactctggaagcagg
cgctctcccgtagcttctagcaagaagcgatcaccaagtgttcgttcctcttctcgttca
tcgtcttcctcttctgcaacctcagaaagtgtaaagtccagtcagttaagaaggaaaaag
gatgagggaagaggcctaacccacagcaaggagaataaaaccaccagagctagtttaggt
gcgagagatggtaaacctgagaggtcagtgagtccaataaaagaagcaaaatctaaggtt
tctccatccaggcgaaatactcacaacagcatttccaggaagaggagtgtatctactagt
ccccctagaggtgttaaatcaaagacacctccaaagaaacacagatctccttcaaataca
cctcccaggagggctcgatcgaaaacgcctttacgtaaagccagatctcccccatattca
cccccaaaaaggacacgctcccctcagcggaaagctaagtctcccagtgactcccctaga
aaagggcgtggcccagcagtttcttctccaagcagaaatcgatcaagaacaccacagcgc
tgggcaagatctgtttcacaaacccctccaatacaccacaaggagagagacagatcttct
cagggatatggaaaacgtagatctccacagcgaaggctggatacatcaagagaaatgcat
aagagagattcttacaagcagacatctaaaagtagggcaaattcccgttctagatctcca
gtgggacatgcaaagtcaagcatacaatcacctcagagaaaagctagatctcgttctaag
tctccatacactaaacaaaggtcaagaagtcgcactccaactcagagagagagctcattt
tctatgtctttaaatcagaggaagagatctagatctaggtctgaacagacacgaaagaaa
tcgcgatctgcgactcctcgaaaaagaggtagatctcgttccacatcagtgcagcagcgt
aaacattcaccttctgtgtcaccgaacgattccaggtcacgttccaggtctcctatgaag
gaaaccaagtcccgttctaagattgtttccaggcattctagatcgcgtagtcaatcacct
ctgataaacaagtcccggtctcgaacacctaagagaaaagagcgatcccgttcagcaact
aagtcctactccaaaataacacaaacaaagagaacttctcccaatgtgcgtgaggtcaca
aaatctagaaaaaagtcctcttcacgttccttgtcacctcaacaacaaacgtttagtcgc
agatctttgtcacccaagaaacacagcagctctagagataaccaaaagaaagttgattca
aggtcaccctctccaaaaaaatctacatccagaacagagagagcaaaactggactctagc
agacaaggttatagctcttcaccagagctaagagtaaggaataaaaaactcagtcggtct
cctgaacagactaaaacatatagaacatcagttgcaaaacagtctttgcaaaaagagagt
tatcgcaggagtcgatcaagatctcctgccactcggaagccacatgataaatacaaagaa
aacagttctcttcctagcaagaaaatctcttctagagatggcacaagttctggagcacct
ttaggacgagctgtgtctccctctcctgaacataaagagcgagttcagcatcgggtcctg
gataccaagtcacgagaatcatctaggcaaagcagggatgatttttcaaggtcttcagca
aaagtgaaagaatctcagtctgataggatgcttgctcagaaagaaaggccaagagtctcc
ccacatggtcactctggttcctcttcagagcgtgagattaaatctaagacacctccaaaa
aaaggagcatctggcacacttgtggggcataaaagcaaagagacatttcaatataaagat
aagtcaggttcctcttcagaaagtaaatcaaggctcaaatcaccacagcataagcacaag
tcttctgagcttgtcgataaaacaaagcattatcagcgcaaagccagggccagctcctca
tcctcatcacattctgaaaatgattcaagccgttcaagaagccggaacagatctggatct
tcatcagatcgtctgcgtaaagctaaaccattacaagtaagatctagttctggagcgagt
tcaaaggaaaaatctaagagtcagtcttcacaaaaggttagttctagatcctcctcagaa
catgaaacgcgattagaaaaggaagcaaagttggtaaaacacatggtttatactaggtcc
tcttctgatgatgaatctaattcaaagaatcaccaaaccaagcagagatttgaagagtcc
ctaggaagtccctcaaaaccaaggccaccaaaacatagcgatgtggcaatgtcctcttca
gaacgtaaatctagacccataaagcacagaactagttcagcctcttcttcagaacgaccg
cttaaagcaaaagtaccagcagaacgccaacctattcgggcacgtaaaagtagatcaagt
tctggatcctcttctgatccccagtctgactctagagtaatgcaacaaaaaaaatctgtc
ccctcctattctaaatctagaccaatccaaagcaaagcaagcgcagtgactcggcaaact
agatctagaccaccgcaaagaaaaaacagttctgggtcatcttctgaacgtcacccctca
tctagggcactacacaggagcagcagctctggatctcattcagatcatgttaaaactagg
agaacccagcacagaagttcttctgaatcatcctctgaacaagagttaaaccaatctcgg
cgcagaagtagtacttcaccattacaacatgacaaaaagtctaggctgtcccaccgaagt
agttcagaatcagtagaaagagaacataaatccagaccaccaccccatagatctagctct
gaatcttcatcagggcaggattctgaatcaaggctctctgaacctaaagacttttctcga
tcgtcattggaccaaaaagatagatccagacagcctagatctaaagaccgtgatcagtca
ccggagcatagaacgcctcaagaaaaacgcgtttctagatcacctgaaagtgatggcagg
cataggactcctgcacaacccgtgtctccaaaatcccctcaaagtaaagctggtacagaa
cgacttaagagagagaaaacgaggcgcaatggcaagtctgaatcatcatctgagggagaa
gaatcttctaaagcacccccacatcgaacacaatttggctcacctctacagacacttaga
tcttccactgatgcacttatccgtcgatcgaagtctccagcattgaccacaaaatctgac
ccacagcagacatctttaagtacaggttcaccattacaaattcactggaaaacagcctca
cctctttcacctaaagatacttctactaaccggcataaaacgggtatccattcttcaaat
gttgggactgaatctttcactgcatttgctgatgaatcattagggcattctaatgcaact
gaagctgaagaccagttttcactttatgctggtttggttccaccacgtgaaactgataag
agtaagtcttctcccagagaaaatgtgattaatgtggataaacattccacagttcaagct
gggctctgtccagcaataaatgggtcagagactaaattagatctgcctcttttgactgag
agtcagcagtctgattcagatttaaaagctccttcatcacaccccagcatagaagaggca
acgtctcgaactgaatatgttctatcagaaatgacatcagaatctcaattaaatgaattg
tccccaggcaacaaagaaagtcagaaacatccatccaagagagggaaatctggctctctg
tgctcatcatcatcctcttcttcctcctcgtcatcatcctcttcgtcgtcgtcatcttcg
tcatcgtcctcttcttcctcctcctcatcctcctcctcttcagaagatgaggaagagaat
tcttcaaaaaagcaaaagcaaaatattgtaatgtcgccaccctcaaagaggttaaagaca
acagtcagtcagtcagcatcttcaccatctcctaaggccagaactcttgaaaacttggat
tgcgataaatcaatgtcatctgcatctaacacaccagatcgggcaggcaaaaacagtata
tgttcaccagaacagaaaaatgacgatgctgtgcagcttcaggaaagcattagtttggaa
tgtgaattgaagtcgcctacactgtctgggaccaacatttgtacggaacaaagaagcctt
ggctctccagtgccatttggggacaagcttgcacaaaaaaagagattacctattgaaaaa
aaaatgaacgattcaccaagacctgaagattgtcacaaggaatatcaagcaactattcag
gataccaccccagcaaagttccacgagagagattttggagcatccccaaaaagttcaagt
cacattgcagcgcctaatgatgagggtagagcaagattagaaagaagtatctcaaggtct
ccaaaaaggagtttcaaagctaccttgtctccaagcaagtccccatctctggtaacttct
aaaagggcagactcttgtcattctcaaagccggacaccttcccctgataaatctgtgaaa
aaggagtcaccccttcaaaagaggtctacccccacaagaaaaggttctaaatctccaagt
gcagaccgaaagacagagagcaactcagattcatcttctgaagacagtagttccgattcg
tcaagtgaaagtggacacagctcttcagaaggggaatcaaagcgtgttcgtttagatgcc
tctccgaggaaggacactatccaagatcctcctccaataaggcgtattgcctccccagtc
cagagcaaatcatctgtccctctaaaacatgaaccagtcaaagatgttttaagaaagagc
cgctcagtgtctaagtcaccagtcagagagaaagatcgctcgtctttggcaggcagggag
tcgccgaggcagaaaagacgatccctgtcacagtctccttccagaaaaggaacatctaga
acaccaccacggcacaaggctaggacacctcccagagcatttagatcccgctcaaggtca
aggaccgataggcggtttcgtagagagcgctcgcgatcatccccgaggcgttatccctca
cgttcaccttcctggcaggagcgaaggcggtggggccgtcgcaggtctccttcgccgcct
aggcgagggcgctctagatctaacacaagggctgagagaacttggcgttctcgacgaggc
cgttctgggtcttccccttggagaggcagatcaagatcattgtctagacatgaagcgtct
cgttatccccgccgtgggaggtccagatcttctcctagaagaagatcaagatccccacgt
agacgggataagcaaaccagttactatcgcagggaaagatccagctcttcaaggcgaagg
agatctcggactccacagaggaggtcccgttcccctgcaaagagagccaggtcccgctcg
cctgatagaaacaagaattcccagagctccagagctgctggtttgcctagtgatgggcat
tcgccagcagttcaagagaaatcccatggtactgatgagaggccagtgtcagaaaaatct
aggctgtctcaaaaaagtgacctttcccctgtgcggactgaaagcccagcttgtaaaagc
cgttcagcctccccatctaattccacctctccacataaatctggcattgttgtttcaaca
aagctgaagtccccatctcccccacttctggaaaaacacacagataaagtggaaggaagt
ccagacactaaacagtctgggtacacaaaaaaagatattgctcccaacaagagagattca
ggcatactcttgcctagcagcaagggttcccctgcacagacggagcatgtcctggatgaa
tgtagcaggtcaccaccaagactacttagagcaccagctggctccgaaacaactgcagca
tctaaaagtggggaagaccagtccgatgtaatattccaagaccagaaaagagagagtaaa
gagtccccaaaagatgaggctttaacgctgactgaaagcccagcctgtaccatgatggca
aatgtagaaaataggaaggagaggatcgcatcacctccactgacctctgttggagaaacc
gtggcttcaccatctttgaccacaaagtcaagaaggcagagtagttcgtcggacagctct
tcctcttcgtcctcaagctcagactctagtcccaagaagccttctgtggattccgggaat
gtacctgctgtggacagggttcccagccccatgacggctgaaccccccaaagcagcagag
ccccctgttcctttagaaaggaaacggagctcacggagccgcagctcatccgcttcttca
tcatcatcttcctcctcgtcatcctccagttcttcgtccaattccgattcctccaactcg
tcatcctcttcctcgagctcctcctcatcttcctcctcctcatcctccaacaaagccagc
agcaaaaaagcagcgtctcccgttactagaagatcacgcagcccacggaaacctatcgac
tctctgcgtgactcccggtctctaagttactccccagaagaacgtaggcgtcaaccatct
cccccacccccgcgaaggagagaaagggattctgggaggaatcaggagtcgcctgaacgg
aagaggcgaaaggactctcccaactccagatattctcacaaaagaacttcgaggtctccg
tga
DBGET
integrated database retrieval system
