Xenopus tropicalis (tropical clawed frog): 100485071
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Entry
100485071 CDS
T01011
Symbol
aaas
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100485071 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100485071 (aaas)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100485071 (aaas)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
PD40
Motif
Other DBs
NCBI-GeneID:
100485071
NCBI-ProteinID:
XP_002936677
Xenbase:
XB-GENE-967146
UniProt:
F6VY14
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Position
2:147106974..147122467
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AA seq
519 aa
AA seq
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MCSLDLFPPPLNGDQVPLYEYNNEMVAGTGFDNPPPSFQSALVNIPELTIPIDAVKAPGR
MELSSKTAFIHHKESIWKRCLNAWHNVGLAGFLEEMSNSKEEVPPWLCHVARCSLAVCRS
VSSLHGSLFPHLTMKSEDLTAEFSQALDWADSPLRAFAWHPHTNKFALALLDDSIRIYTA
GSPTIPTLKHRLQKDVASMAWKPMCASVLAVACQSCVLVWHVDPTSLSTRPSSGCAQVLS
HPGHSPVTSVCWSPKGGVLLSASPVDTAMLVWDVPTESCIPLQRVGGGGVTFLSWSPDGS
KVLAATPSCVFRVWETQKWTCERWPTLQGRCQTGCWSPDGSRLLFAVKGESVIYSLCFSV
SEGETQAGVGGSQSATVVADVSEVVFTTSAGEIRVGGDIQSMCWDPSGERLAVLLKGNPE
FEESQPVIAVFRTRNSPIFELLPCGFIQGRKGETPQLFQFHPGFHKGALLSELWSSGRVN
HFPFYFVNAQCPRFSPESSAVVPGNTTSIAKPRTLFTET
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcccttgatctgttccctcctcctcttaatggagatcaggtgccactttatgaa
tataacaatgagatggtggccgggacagggtttgacaatccaccgccctctttccagtct
gcgttggtaaatattccagagcttactatacctattgatgcagtgaaggctcctggccga
atggagttgtcaagtaaaacagcttttatccatcacaaagagtcgatctggaagcgctgt
ttgaatgcatggcataatgtgggacttgctggtttcctggaggagatgtctaactccaag
gaggaagttcccccctggttgtgccatgttgcacgctgttcccttgcggtgtgccgctca
gtctcctctttgcatgggtctctctttccacaccttacaatgaagagtgaggacctcact
gctgagttttctcaagctcttgactgggctgactctccattgcgtgcatttgcatggcat
ccccacacaaacaagtttgccttggctttgttagatgactccatccgaatctacacagca
ggcagcccaactatccccacactgaagcatcgcctacagaaggatgtggcaagtatggct
tggaagcccatgtgtgcatctgtccttgctgtggcctgccaaagctgtgtgctggtgtgg
cacgtggaccccacttccctatcaacaaggccttcctctggttgtgctcaggtcctatca
cacccaggccatagtccagtcaccagtgtttgctggtctcccaaaggtggagtgttgctt
tctgcctcacctgtagacactgctatgttggtctgggatgtacccacagaaagctgtata
cccctgcagcgggttgggggtggcggagttaccttcctgtcttggtctccagatggaagc
aaagttctggcagccactccatcttgtgttttcagggtgtgggagacccaaaagtggaca
tgtgagcgttggcctactttgcaaggtcgttgccagactggttgctggagccccgatgga
agtcgtcttctttttgctgtaaagggagagtctgtaatatatagtctgtgcttttctgtc
tctgagggtgaaacgcaagctggcgtaggaggcagtcagagtgccacagttgttgctgat
gtgtctgaagtcgtattcacaacttctgctggagaaatcagggttggaggggatatacag
tcgatgtgctgggaccccagtggagagaggctggcagttctactaaaaggaaatcctgag
tttgaagaaagccagccagtgattgctgtttttaggacccgcaacagtcccatttttgag
cttcttccatgtggcttcatccaaggtagaaaaggagagaccccacagctgttccagttt
catcctggttttcataaaggcgccctcctgtcagagctgtggagttcaggccgtgtcaat
catttcccattctactttgtgaatgcacagtgccctcgtttcagcccagaaagcagtgct
gtggtgccaggcaacactaccagcattgccaagcccaggacgctatttacagaaacctga
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