Xenopus tropicalis (tropical clawed frog): 100491430
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Entry
100491430 CDS
T01011
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100491430 (tmc5)
03037 Cilium and associated proteins [BR:
xtr03037
]
100491430 (tmc5)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
100491430 (tmc5)
Cilium and associated proteins [BR:
xtr03037
]
Other cilia and associated proteins
Stereociliary proteins
100491430 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100491430
NCBI-ProteinID:
XP_002932256
Xenbase:
XB-GENE-981337
UniProt:
A0A6I8PVJ5
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All DBs
Position
9:32384363..32438912
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AA seq
900 aa
AA seq
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MSRNNSDGFINSAYHDSETLQMDRGPYSTSFSRQQSSFYNPNPYNDENIGSAEQPPERRH
NRGFLPMNSVRQDPEYSQQIQRNYVPNNNPYGGEYSNPAFEPDSNTAASNEYNGTEGHPY
FGRGIDLAEDPSFRRRSGKKSTAALQSRISEVDPSLDKEENEKLAKKLADSPTADIAKEL
RKLPISVKEKRDLRSKVYLLKQKSFKGAHNMDCCNGCVHNIRVWLRKSKQSTADILESLQ
LWHSTLKVIGSKFGTSILSYFIFLKWLLRFNIFSFIVNFSFITIPQFFAMSPNNLSFSGL
ELLTGAGYFQDTILYYGFYTNSTIRSNESLAPYNMQLAYFFTIGLYLAACFLILLFSMAR
SFRKNFINPASFSGNACKLLCSWDFSITHEKAVNLKRKHLSTQIKEMLSEKLQEKLKLTV
SQRIVRLLIHLAAWLASSGIAVGCCAGVYYLCLNLTSIQNASANELTKQAATLLVPVVVA
LINVIIPLVYAMFFLVEKYKYPRHEIYVEIIRNVLLKISIIGILCYYWLQSVAESQSECW
ESFVGEDIYRLVVIDFIFALIGSFFGEFIRRIIGMHCCKKLGMPEFDIARNVLDLIYAQT
LAWIGMYFSPLLPVIQIIKLFIIFYVKKVSLMMNCTPPRRAWRAAQMTTIFIFLLFFPSF
AGVLCMIGVTIWRRQPSQNCGPFRGLETPYQSISNWVSSLTVFNNSLWVVWIYENIIESV
LFFYILTLIVLIISYLYWQIIQGRKILVKHLYQQIANEGKDKSFLLDELRKAQSLNKAPD
RAPYKAAQKQIQPSYRSQEMHTVNEHIPLEPRSESVGTSDVLGLAMRARQQAEMEERSSA
LNSRLSSNNGYPPDSPGVTRNSRKQQDPDREPFRNNDRRSEAIAMIMRERQLAERGPPTG
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaataacagtgatggttttattaattcagcctatcatgactcggaaaccctg
caaatggacagaggaccatatagcacatctttctcaagacagcaatcatcgttctacaac
cccaatccctacaatgatgaaaatattggctctgctgaacaaccacctgaaaggaggcat
aacagagggtttttgccaatgaactcagtgcggcaagatcctgaatacagccagcaaatt
caaagaaactatgttccaaacaataatccctatggaggggaatatagtaatcctgccttt
gaaccagattccaatacagcggcatctaatgagtataatggcactgaaggacacccatac
tttggcagagggattgacctagctgaagatccaagcttcagaagacgatcaggtaaaaaa
agcactgctgcacttcagtcaaggatttccgaggtggatccctcccttgacaaagaagaa
aatgaaaagcttgctaagaagcttgcagacagcccaactgctgacatagccaaagaactc
agaaagcttccaatttctgtgaaagaaaaacgtgacctgaggagcaaagtctacttgctg
aaacagaagtcatttaaaggtgcccacaatatggactgttgtaacggttgtgttcacaat
ataagagtgtggttacggaaatccaagcagtcaacagcagatattttggaatcactgcaa
ctttggcacagcactctcaaagtcatagggagcaagtttggaacaagtattctctcctat
tttatattcctgaagtggctcctgcggtttaacatcttctcattcattgtgaacttcagt
tttattacaattccacagttctttgctatgagccccaacaacttatcattttctggcctg
gaactgctcacgggtgctggatattttcaggacactattttgtattatggtttttacaca
aattctacaatcagaagcaatgaaagcctggctccttacaacatgcagcttgcatatttc
ttcactatcggactgtacctagcagcctgcttccttatcttgctgttcagcatggcaaga
tcattccggaagaatttcattaatccagcttccttctcgggcaatgcttgcaagcttctc
tgcagttgggatttcagcataacccatgaaaaggctgtgaacctgaaaagaaagcatcta
agtacacaaataaaggaaatgctatcagaaaaattacaggagaaactaaagttaactgtg
agtcagaggattgtacgtttgctaatccatttagcagcatggttggcctccagtgggatt
gcggttggatgctgtgctggtgtatactatctctgtttgaaccttacatccattcagaat
gcaagtgctaatgaactgacaaagcaagcagcaacattactggttccagtggtagttgcc
ctgatcaatgtcatcattcctcttgtctacgccatgtttttcctcgtagagaaatacaag
tacccacggcatgagatctacgtagaaattataaggaatgttctcctgaagatttccatc
attggcattctgtgttattattggttacaatccgttgctgaatcccagtctgagtgctgg
gaatcatttgtgggagaagatatctatcggcttgtagtgatcgatttcatatttgccctg
atcggttccttctttggagaatttataagaaggatcatcgggatgcactgctgcaaaaaa
ttagggatgcctgaatttgatatagcacggaatgtcttagatttgatatatgcccagaca
ctggcatggattggaatgtacttctcccccctcctgccagtaatccagattattaaactc
tttatcattttttatgtaaaaaaggtgagcctaatgatgaactgtaccccacctcgcaga
gcctggagagcagctcaaatgacaacaatcttcatatttctcttatttttcccatcattt
gctggagtcctttgcatgatcggtgtcactatttggagacgacagccttcacaaaattgt
ggtccttttcggggcttggaaactccctatcaatcgatatccaactgggtgtcttccttg
accgtttttaataactcactgtgggttgtgtggatttacgaaaatataatcgagagtgtt
cttttcttctacatcctgacgctaattgtgctcataatttcttatctgtactggcaaatt
atacaaggccggaaaattttggtgaagcatttgtaccagcaaattgccaatgaaggaaaa
gataaatcctttttacttgatgaacttcggaaagcccagagtctaaataaagctccagac
agggcgccatataaagcagcacagaaacagatacagccttcatacagaagtcaggaaatg
cacactgttaatgaacacattccacttgaacccagaagtgaaagtgttgggacttcagat
gttctggggctagcaatgagggcgaggcaacaggctgagatggaggaaagatcctcggca
ctgaatagtagactttcaagcaataatggttaccctccagattcaccgggagtaacacgg
aattcaagaaaacagcaggacccagacagggagccatttcggaacaatgataggcgatca
gaggcaatagcaatgattatgagagaaagacaattggctgaaagaggaccacccactggt
taa
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