Xenopus tropicalis (tropical clawed frog): 100495354
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Entry
100495354 CDS
T01011
Symbol
nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
100495354 (nyx)
Proteoglycans [BR:
xtr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
100495354 (nyx)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRRNT
DHU1_N
Motif
Other DBs
NCBI-GeneID:
100495354
NCBI-ProteinID:
XP_031752664
Xenbase:
XB-GENE-949924
UniProt:
F6PTY8
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Position
2:complement(56665682..56671122)
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AA seq
468 aa
AA seq
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MGKGMFAKILNAFLFVQPIYAIWACYRSCPSNCVCTQERSCSVLCDRIGLPEIPKEFPCE
ASFINLDKNNIKFLYERAFGTLPLLKGLSLSHNNISFITPGAFKGLPNLTELKMAHNEYI
RYLHTRTFSVLKKLVKLDLADCNLFNIPDRIFVELPSLHELIFFQNNFRRIPGAIRGMEN
LTHIYLESNRIEAVAYNSLQDLINLKYLNLQDNKINVIHDRSFQDCQKLEYLYLNDNLLN
ELPENSFKGLKCLKMLNLGGNFIRNVSSAWFQDLVELEVLYLDRNRISYIEEGAFENLTS
LVTLHLNSNNLTTLPFEVFRPVYFLGRLFLFRNPWECDCRIKWLQDWMDNYKLVRDVPCS
APALVAGMDLSSILLKKSQDGVCLDPTDENFTYFVPLPTDGLQSTMETKLSSLISRLLLP
KGNYEASGNITDSSDNTTLSDGKNTASSLDLSQKVIAHILCFILSLFL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagggatgtttgccaagattctaaatgctttcctttttgtgcaaccaatttat
gccatatgggcatgttaccgctcctgcccatcaaactgcgtttgcactcaggagcgaagc
tgctcggttttgtgtgatcgaattggactcccagagatcccgaaggaattcccttgtgaa
gcttcctttattaaccttgataaaaacaacatcaaatttctatatgaaagagcatttggg
acgctgcctttattgaaagggctctcactgagtcacaacaacatatcctttatcactcca
ggggctttcaaagggctccctaacctgaccgagctgaaaatggcacataatgagtacatt
cggtatttgcacaccagaacattttcagttctgaagaagcttgttaaacttgacctagcc
gactgcaaccttttcaacatcccagacagaatttttgtggaactcccatctcttcacgag
ctaatcttcttccaaaataatttccgaagaataccaggtgctatcagaggaatggagaat
ctaactcatatttacctggaaagcaacagaattgaagccgtggcctataattccctccaa
gatctaatcaacctgaagtatcttaacctccaagacaataaaattaatgtaatccatgac
cggtctttccaagactgtcagaaactggaatatctctatctcaatgacaacttattgaat
gagttaccggaaaactctttcaaaggcctcaaatgtttgaagatgttaaacctgggtgga
aattttataaggaatgtatcaagtgcgtggtttcaggatctagtagaactcgaggttctc
tatcttgaccggaacagaatcagttacattgaagaaggggcttttgaaaatctcaccagc
ttggtaacattgcacctgaacagcaacaatctaaccactttaccttttgaagtgttcaga
ccggtttattttttgggtagactttttctctttagaaatccctgggaatgtgactgcagg
ataaaatggttacaagactggatggataactataagcttgttcgcgatgtaccctgctct
gcaccagcattagtggcaggcatggaccttagtagtatactgttaaagaaatcacaggat
ggagtctgcctggacccaactgatgaaaactttacatattttgtcccactccctacagat
ggacttcagtcaacaatggaaaccaaactaagcagccttatctcaaggctcctcttacca
aaaggaaattacgaagcatctggaaatataactgattcttcagacaatactacattatct
gatggaaagaacactgcatcctccctagatctttcacagaaagtaatagcccacatactg
tgctttattctatcactgtttctctaa
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