Xenopus tropicalis (tropical clawed frog): 407923
Help
Entry
407923 CDS
T01011
Symbol
rnf139
Name
(RefSeq) E3 ubiquitin-protein ligase RNF139
KO
K15703
E3 ubiquitin-protein ligase RNF139 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
407923 (rnf139)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
407923 (rnf139)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
407923 (rnf139)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
407923
NCBI-ProteinID:
NP_001001242
Xenbase:
XB-GENE-488451
UniProt:
F6YGI6
LinkDB
All DBs
Position
6:complement(140379113..140386832)
Genome browser
AA seq
663 aa
AA seq
DB search
MESPPVVVGQRVRAVLDVALRVPSLFITDAILNLPHDASAGFLSLLLQLALRLLGVVASI
VVLVLSRRALFKFYMITAALALAATSVLVSYYATLHLNFSRASYSAALGLEFLPSNGPSL
WMTLIVLQLIFGIGFITLLQVQSYSQLIILDLLIPTVGFIIELPLGVQQILVFISALVLI
LYTVACLAFRFRWFYYSTKYTVLLLKHMYQVYGIQLMVEDAWKKIHFPDVLRVFWLTRLA
TQAVFLFYVVRESSSDAGEVSYFIPWNDLSELVCNLIINGCDSTLTVLGMSAVISSIAHY
LGLGILAFIGSTEEEDKRLGFVAPVLFFILALQTGLSGLKPEERLVRLCRNMCLLLTAVL
HFIHGMTDPVLMSLSASHVSSYRRHLPVLLVSVCLFVLPVLLSCVLWHYYALNTWLFAVT
AFCVELCLKVIVSLTVYTLFMIDGYYSVLWEKLDDYVYYVRSTGSIIEFIFGVIMFGNGA
YTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKTFMNRRKAVKKINSLPEVKGSESREID
DVCAICYQEFHTSARITPCHHYFHALCLRKWLYIQDTCPMCHQKVYIDDDSKENASVSNN
NGFVAPNEEPAQPDADREADQELEEQNLSEDDSVECDDEEWTTEPHNSTSEEHVSDDTDS
LGE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccggtggtggtcgggcagcgggtacgggccgtgctggatgtggccttg
cgggttccctctctctttatcacggacgccatcctgaacttgccccacgatgcctctgcc
ggcttcctgtcactgctgctgcagctggcgctcagactgctgggtgttgtggcatccatt
gttgtgctggtgttgtctcgcagagcacttttcaagttctacatgatcacggcggcccta
gcgctggctgcaacttcagtgttggtcagttactatgccaccttgcacttgaacttttcc
cgtgcctcctactccgcggctttggggcttgaatttcttccttccaacggaccttcccta
tggatgacgcttattgtattacaacttatttttggcattggtttcatcacgttactccag
gtccagtcctactcccagctaataatacttgacctgctgatccccacagttggctttata
atagaacttccactcggcgtgcaacaaattttggttttcatttctgccctcgttctcata
ctctacactgtagcttgcttggctttccgcttcagatggttctactactcaacgaaatat
accgtgctcctcctcaagcacatgtaccaagtgtatggaatacagctcatggttgaggat
gcttggaaaaagattcacttcccagacgtgctgcgcgttttctggctgacgcgcttagcg
acccaagccgtgttcttattctacgtggtcagagagtcgagcagcgacgcgggagaggtt
tcttactttataccttggaatgacctttcggaacttgtgtgcaacctaattatcaatggc
tgcgattccaccctaacagtattgggaatgagcgcggtgatctcgtcaattgcccattac
ttgggcctgggaattctagccttcatcgggtcgacggaggaagaggataagcggctcggc
tttgtggcaccagtgctgttcttcatattggctctccaaactggactgagtgggttgaaa
ccggaggaacgacttgtccgcctttgtcgaaacatgtgccttttgttaacagcagtcttg
catttcatccacggaatgactgaccccgtgctaatgtcacttagtgcctcccatgtgtca
tcgtaccgcaggcaccttccagtattgctggtttctgtttgcctttttgttcttccagtt
ctgctcagttgtgtgctgtggcactactatgcacttaacacatggctgtttgccgtcacg
gcattctgcgtagagctttgcttgaaagtcattgtttctctgacagtctacacactgttt
atgattgacggttactacagcgtgctgtgggaaaagctcgacgactacgtctactacgtg
cgctcaactggtagtattatcgaattcatcttcggagtaatcatgttcggaaatggggcc
tacacgatgatgtttgaatctggcagcaagatccgggcatgcatgatgtgtctgcacgct
tacttcaacatctacctgcaagccaagaacgggtggaagaccttcatgaaccggaggaaa
gctgtgaaaaaaataaactcgcttccagaagtcaagggttcggaatcacgagagatagac
gacgtgtgtgcgatctgctaccaagagttccacacctctgcccgtattaccccatgccac
cattactttcatgccctttgccttcgcaagtggttgtacatacaagacacttgtcctatg
tgccatcagaaagtatatatcgacgatgattcaaaagagaacgcctctgtatccaacaat
aatggttttgtggcgcccaacgaggaacccgcgcaacccgacgctgatcgggaggcggat
caggaactcgaggagcaaaacctcagcgaagacgacagcgtggagtgcgacgacgaggaa
tggacgacagaaccgcacaactccacttctgaggaacacgtcagcgacgatacagactct
cttggggaataa
DBGET
integrated database retrieval system
