Xenopus tropicalis (tropical clawed frog): 448228
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Entry
448228 CDS
T01011
Symbol
hmgb3
Name
(RefSeq) high mobility group protein B3
KO
K11296
high mobility group protein B3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
448228 (hmgb3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
448228 (hmgb3)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
448228 (hmgb3)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
448228 (hmgb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_box_5
YABBY
Motif
Other DBs
NCBI-GeneID:
448228
NCBI-ProteinID:
NP_001004888
Xenbase:
XB-GENE-1002014
UniProt:
Q6DJ93
LinkDB
All DBs
Position
8:58155238..58159719
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AA seq
202 aa
AA seq
DB search
MAKGDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKF
DDLAKADKVRYDREMKDFGPVKKGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI
GDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDCAKGAPKLARKKE
EDEDDDDEDEEEDEEDEEDDDD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtgaccctaagaagccgaaaggcaagatgtctgcctatgcatattttgtg
cagacatgccgtgaagaacacaaaaagaaaaatcctgaaatccctgtgaactttgcagag
ttttccaagaagtgctctgagagatggaagaccatgtcggctaaagagaaatcaaagttt
gacgatctggcaaaggcagacaaagttcggtatgacagagaaatgaaagactttggacct
gtaaagaaaggcaagaagaagaaagatccaaatgcccctaaaaggccaccatctggcttt
ttcctcttctgctcagaattccgtccaaaaataaaatctacaaaccctggtatttccatt
ggtgatgtggcaaagaagctaggtgagatgtggaataaccttaacgatggtgagaagcag
ccatacaacaacaaggcagctaaactcaaggaaaaatatgaaaaggatgttgctgattac
aaatctaaaggaaagttcgactgtgctaaaggagccccaaaattagcacggaaaaaagag
gaagacgaggatgatgatgatgaagatgaggaggaggatgaagaggacgaagaagatgat
gatgattaa
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