Xenopus tropicalis (tropical clawed frog): 448710
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Entry
448710 CDS
T01011
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
448710 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
448710 (snrpd2)
03032 DNA replication proteins [BR:
xtr03032
]
448710 (snrpd2)
Spliceosome [BR:
xtr03041
]
Complex A
U1 snRNP components
Sm proteins
448710 (snrpd2)
U2 snRNP components
448710 (snrpd2)
Complex B
U1 snRNP components
448710 (snrpd2)
U4/U6.U5 tri-snRNP components
448710 (snrpd2)
Complex C
U2 snRNP components
448710 (snrpd2)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
448710 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
NUMOD4
GIT1_C
Ldh_1_C
Motif
Other DBs
NCBI-GeneID:
448710
NCBI-ProteinID:
NP_001005128
Xenbase:
XB-GENE-964248
UniProt:
Q6DDC4
LinkDB
All DBs
Position
8:complement(70383763..70389007)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLLAGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccttaacaagcccaaaagtgagatgacacctgaagagctacaaaagcgagaa
gaggaggagttcaacacagggccactgtctgtgcttactcagtctgtgaagaacaacaca
caagttctgatcaactgcaggaataacaaaaagttgctaggcagagtaaaagcatttgac
agacactgtaacatggtactggaaaatgtgaaagaaatgtggactgaggtccctaagagt
ggcaagggaaaaaagaagtccaaaccagtgaacaaagacagatatatttccaagatgttc
cttcgtggagacagtgtcatcgttgttctgcggaatccactgcttgctggaaagtga
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