Xenopus tropicalis (tropical clawed frog): 548724
Help
Entry
548724 CDS
T01011
Symbol
tmco1
Name
(RefSeq) transmembrane and coiled-coil domain-containing protein 1
KO
K21891
calcium load-activated calcium channel
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
548724 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
548724 (tmco1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
548724 (tmco1)
Transporters [BR:
xtr02000
]
Other transporters
Pores ion channels [TC:
1
]
548724 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
Vpu
DUF5683
DUF6809
Exonuc_VII_L
Nucleoside_tran
ArsP_1
ToxN_toxin
DUF4257
Myc_target_1
DUF2207_C
DivIC
Motif
Other DBs
NCBI-GeneID:
548724
NCBI-ProteinID:
NP_001015970
Xenbase:
XB-GENE-942601
UniProt:
A0A803KHW3
LinkDB
All DBs
Position
4:complement(119252174..119268175)
Genome browser
AA seq
188 aa
AA seq
DB search
MSTMFADTILIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKESITES
AGRTQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLIGEDYSDCSFIFLYILCTMSIRQNIQKLLGLAPSRAATKQAGGFLGP
PPQAGKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtactatgttcgctgataccatcctgatcgtgtttatatcggtgtgcacagcgctg
ctggctgagggtataacatgggttctggtttaccgaacagacaagtacaagagattaaaa
gcagaagtggaaaagcaaagtaaaaaattggaaaagaagaaagaatccataacagaatca
gctgggcgcactcaaaagaaaaaaattgaacgccaagaagagaaactcaagaacaataac
agagatctctctatggttcgaatgaagtctatgtttgctattggcttttgctttacagca
cttatgggcatgttcaactcaatatttgatggacgggttgtagcaaagctgccttttgtg
ccactgtcctacattcagggactctcgcacagaaacctcattggagaagattactctgac
tgctcatttatcttcttgtacatactgtgcaccatgtccattcgacagaatatccagaag
ttgttgggacttgctccatctcgtgctgctacaaaacaagctgggggatttctgggcccc
ccaccccaggcaggaaaattctcctag
DBGET
integrated database retrieval system
