Xenopus tropicalis (tropical clawed frog): 549925
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Entry
549925 CDS
T01011
Symbol
vps26a
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
549925 (vps26a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549925 (vps26a)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
549925 (vps26a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
549925
NCBI-ProteinID:
NP_001017171
Xenbase:
XB-GENE-944860
UniProt:
Q28HT6
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Position
7:38851460..38865848
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AA seq
326 aa
AA seq
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MSFLSGFFGPICEIEVVLNDADTRKVSEIKTEEGKVEKHFLFYDGESVAGKVNIVFRQPG
KRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRNYDFEFMQVEKPYES
YIGANVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEITGIGPSTTTETETVAKYEIMDGAP
VKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAPE
KIRKRTNFHQRFEPQEPQASAEEPEI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctgagtggattctttggtcccatttgtgagatagaagttgtactgaatgac
gcggataccaggaaagtgtcagagatcaaaactgaagaaggcaaagtagagaaacacttc
ttgttctatgatggggagtcagtagctggaaaggttaatattgtcttcaggcagcccggt
aaaagattagagcatcaaggaatccgcattgagtttgttgggcagattgaactttttaat
gacaaaagcaacacacatgaatttgtcaatctagtgaaagagttggccctacctggagag
ctgactcagagtagaaactatgattttgaatttatgcaagtggagaagccatatgaatcc
tacattggtgcaaatgtgaggctgaggtatttcctcaaagtaacaatagtacggcgcctt
acggatttggtcaaagaatatgaccttatcgtccaccaactggctacctaccctgatgtg
aacaattccatcaaaatggaagttggcatagaggattgcctgcatatagaatttgaatac
aacaagtcaaagtaccacttaaaagacgtcattgttggaaaaatctactttctattggtc
agaataaaaatccagcacatggagttgcaattaataaagaaagagatcactggaataggc
cctagcactacaacagagactgaaacggtcgcaaaatatgaaatcatggatggagcacca
gtcaaaggtgaatctattcctattcggcttttcctcgctgggtacgatccaacaccaacc
atgagagacgtcaacaaaaagttttctgtcagatattttttaaacctggttcttgttgat
gaagaagacagaagatatttcaaacaacaggagatcatcttgtggagaaaagcccctgaa
aagatcaggaaaagaaccaattttcatcagcggtttgagccacaggagccacaagcatct
gccgaagagccagagatctaa
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