Xenopus tropicalis (tropical clawed frog): 779970
Help
Entry
779970 CDS
T01011
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
779970 (dhx35)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
779970 (dhx35)
Spliceosome [BR:
xtr03041
]
Complex C
Other components
Complex C specific factors
779970 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
779970
NCBI-ProteinID:
NP_001072515
Xenbase:
XB-GENE-5868299
UniProt:
Q0P4P9
LinkDB
All DBs
Position
10:40368702..40388712
Genome browser
AA seq
701 aa
AA seq
DB search
MAAPVGPVRFWKPGTEGPGATIAEERQSNFEVSSVIYNPHASLSIEHQRQKLPVFKLRNH
ILYLVENYQTVVIIGETGCGKSTQIPQYLTEAGWTAEGRVVGVTQPRRVAAVSVAGRVAE
ERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMSDPLLTRYSVLMLDEAHERT
LYTDIAIGLLKKVQKKRGDLRLVVASATLDAEKFKAFFNQNDTNDPSRDTCAILTVEGRT
FPVDIFYTQSPVPDYLKSTVQTVMKIHQSDLEGDILAFLTGQEEVESVVSMLVEQARILS
RSGMKKHLRVLPMYAGLPTSEQMKVFERVSHSARKVVVATNIAEASITINGISFVIDCGF
VKLRAYDPKRAVESLVVVPVSQASANQRAGRSGRNRSGQCYRLYTEEDFLKLPPSTVPEM
QRSNLAPVILQLKALGIDNVLRFHFLSPPPAQSMVQALELLYALGGLDKHCRLTEPLGVR
MAEFPLNPMFAKMLLESGNFGCSAEILSIAAMMQIQNIFVVPPNQKSQAIREHRKFAVEE
GDHLTMLNVFEAFIKFNKSSHWCQQRFLNYKGLMRAVTVREQLKKLLSKFKVPKNSSEGD
PDPILRCIVSGFFANAAKLHSTGVYRTVRDGHELYIHPTSVLYAEKPPNWVLFSEVVQTN
KYYMRDVTAVESAWLLELAPHFYQQGTHLSRTSKRAKIDNL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtggggccggtacggttctggaagccgggcactgaaggcccaggcgcc
accattgctgaagagaggcagagtaattttgaggtctcctctgtcatctacaacccacat
gcctctctctccatagagcatcagagacagaagctgcctgtgtttaagctgagaaatcac
atcctgtacctagtggagaattaccagactgtggtgattattggagagacagggtgtggg
aaaagcacccagataccgcagtacctgacagaggccggatggacagcagaaggacgagta
gtgggggttacccagccacgtagggtagcagcagtttcggtagccggacgtgtggcggaa
gagcgtggagctgtgctggggcatgaggttggctattgcatacgctttgacgactgtact
gatccacaagccacacgtatcaagtttttgacagatgggatgcttgttagagaaatgatg
tcggatcctctgcttactcgatacagcgtgctgatgttagatgaagcccatgagcgcact
ctctacacagacattgccattggcctactgaagaaggttcagaagaaaagaggggacctt
cgccttgtggtggcatctgcaacacttgatgccgagaaattcaaggcattctttaaccag
aatgacaccaacgaccccagcagggacacgtgtgccatccttacagttgaggggaggacg
tttcctgtggacattttctatacacagagccctgtcccagattacttgaagtccacagtg
cagacggtgatgaagattcaccagagtgacctggaaggggacattctggcctttctaact
ggtcaagaggaagtggagagtgtggtgtccatgcttgtagaacaggcccgcatcctctct
cgctctggcatgaagaagcatctgcgggtcctgcccatgtatgcaggactcccaacctct
gagcaaatgaaggtgttcgagagggtctcccacagtgccaggaaggtggtggttgcgacg
aacattgcagaggcttccattactataaacgggatctcctttgtgatagactgtggtttt
gtcaagttgcgggcatatgaccccaagcgtgccgtggagtccctggtggtggttcccgta
tcacaggcttcagccaatcagagagcaggacgcagtggcaggaaccgctctgggcagtgc
taccgactgtacacagaggaagattttctcaagctgcctccttccacagtaccagagatg
cagagaagcaacctcgctccagtcatcttgcagcttaaagcgcttggcatagacaatgtg
ctacgctttcacttcctttcgccgccacctgcacagtcgatggttcaggccttggagctg
ctgtatgcattaggaggtctggataagcattgccgactaaccgagcctcttggagtgcga
atggctgaatttcctcttaacccaatgtttgccaagatgctacttgagtctgggaatttt
ggttgttcggctgagatcctaagcattgcggcgatgatgcagattcagaatatctttgtc
gtcccaccgaaccagaaatcacaggcaatacgagagcaccggaaatttgccgtggaggaa
ggcgatcaccttaccatgctgaatgtgtttgaagctttcatcaaatttaacaagagctct
cactggtgtcagcagcgtttcctgaactacaaggggctcatgagagcagttaccgtcagg
gagcagttgaagaagcttctgagcaagttcaaagttcctaagaactccagtgaaggggat
ccggaccccatcctgcggtgcattgtgtctgggttctttgctaatgctgccaagctccac
tccactggagtctacaggacagtgcgagatggtcatgaactatacattcatcccacgtca
gtgctgtatgcagagaagcctccaaactgggtgctcttcagtgaggtggttcagaccaat
aaatattacatgcgagatgtgacagccgtggagtcagcatggcttttggagctggcaccg
cacttctaccagcaggggacgcacctctctcgaacatccaaacgggctaaaatagacaac
ttgtga
DBGET
integrated database retrieval system
