Xylophilus rhododendri: GT347_13015
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Entry
GT347_13015 CDS
T06383
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xyk03032
]
GT347_13015 (gyrB)
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_13015 (gyrB)
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GT347_13015 (gyrB)
DNA replication proteins [BR:
xyk03032
]
Prokaryotic type
DNA Topoisomerases
GT347_13015 (gyrB)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GT347_13015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QHI98827
UniProt:
A0A857J558
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All DBs
Position
2825719..2828334
Genome browser
AA seq
871 aa
AA seq
DB search
MSAENSNPPHTEPVYEAEVENAVPVEIAAPDGSYGAGSITILEGLEAVRKRPGMYIGDTS
DGTGLHHLVFEVVDNSIDEALAGYCDDIVVTIHSDNSISVTDNGRGIPTGIKFDDKHEPR
RSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKMLRLTVRREGKVHSLEFSR
GFVQNRLLEQQQGVEVSPMKITGDTDKRGTEVHFLPDTEIFKENHDFHYEILAKRLRELS
FLNNGVRIRLKDERSGKEDDFSGAGGVRGFVEFINKGKTVLHPTSFYAAGEKPAETYGGI
PGTHIGVEVAMQWNSSFSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVINKYIEEHEFAKK
AKVEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVGRLLTDYLLERP
NDAKIICGKIIEAARAREAARKARDMTRRKGVLDGMGLPGKLADCQEKDPAGCEIYLVEG
DSAGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLTSNEILTLITALGTGIGKATGIG
GTAGVDDFNVAKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLY
KVKVGKEEQYLKDGSELDSFLLRVALKDARVETGGATTRTLEGDTLRELAAKHQVAEGVI
ARLGGFMDVEALRAIADGVALDLDTVESAEASAVKLQVYLRELQTTGVPAEVAGEFDVRT
DKPVLRISRRHHGNVKSSVITQDFVHGADYEALALAAATFNGLLADGALVRRGEGERAKE
EKVGDFRSAMRWLLSEAERATARQRYKGLGEMNPEQLWETTMDPNVRRLLRVQIDDAIEA
DRVFTMLMGDEVEPRREFIETNALRASNIDV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagaaaacagcaacccgccccacaccgaacccgtctacgaagccgaggtcgag
aacgcggtaccggtcgagatcgcagcaccggacggcagctatggcgcgggctccatcacc
atcctcgaaggcctggaagccgtgcgcaagcgccccggcatgtacatcggcgacaccagc
gacggcaccggcctgcaccacctggtcttcgaggtggtggacaactcgatcgacgaggcc
ctggcgggctactgcgacgacatcgtcgtcaccatccattccgacaactcgatcagcgtc
accgacaacggccgcggcatccccaccggcatcaagttcgacgacaagcacgagccccgg
cgcagcgccgccgagatcgcgctgaccgagctgcatgccggcggcaagttcaaccagaac
agctacaaggtctcgggcggcctgcacggcgtgggcgtgtcctgcgtgaacgcgctcagc
aagatgctgcgcctgacggtgcgccgcgaaggcaaggtgcattcgctggaattcagccgc
ggcttcgtgcagaaccgcctgctggagcagcagcagggcgtggaagtctcgccgatgaag
atcaccggcgacaccgacaagcgcggcaccgaggtgcacttcctgccggacaccgaaatc
ttcaaggaaaaccacgacttccattacgagatcctggccaagcgcctgcgcgagctgagc
tttttgaacaacggcgtgcgcatccgcctgaaggacgaacgcagcggcaaggaggacgac
ttctccggcgccggcggcgtgcgcggcttcgtggagttcatcaacaagggcaagaccgtc
ctgcaccccacctccttctacgccgccggcgagaagccggccgagacctatggcggcatc
cccggcacccacatcggcgtggaagtggcgatgcagtggaacagcagcttctccgaacag
gtgctctgcttcaccaacaacatcccgcagcgcgacggcggcacccacctcaccggcctg
cgcgccgcgatgacccgggtcatcaacaaatacatcgaagagcacgagttcgccaagaag
gccaaggtcgaagtcaccggcgacgacatgcgcgaaggcctgtgctgcgtgctgagcgtg
aaggtgcccgagcccaagttcagcagccagaccaaggacaagctggtctccagcgaagtg
cgcgcgccggtggaagacatcgtcggccgcctgctcaccgactacctgctggagcgcccc
aacgacgccaagatcatctgcggcaagatcatcgaagccgcccgtgcccgcgaagccgcc
cgcaaggcgcgcgacatgacccgccgcaagggcgtgctcgacggcatgggcctgcccggc
aagctggccgactgccaggagaaggatccggccggctgcgagatctacctggtcgagggc
gactccgccggcggcagcgccaagcagggccgcgaccgcaagttccaggcgatcctgccg
ctgcgcggcaagatcctgaacgtggagaaggcccgctacgagaagctgctgacctccaac
gaaatcctgaccctgatcacggcactcggcaccggcatcggcaaggcaaccggcatcggc
ggcacggccggcgtggacgacttcaacgtcgccaagctgcgctaccaccgcatcatcatc
atgaccgacgccgacgtggacggcgcccacatccgcaccctgctgctgaccttcttctac
cgccagatgcccgagctggtggaacgcggccacatctacatcgcccagccgccgctctac
aaggtgaaggtcggcaaggaggagcaatacctcaaggacggcagcgaactcgacagcttc
ctgctgcgcgtggccctgaaggacgcccgtgtggaaaccggcggcgccaccacccgcacg
ctcgaaggcgacaccctgcgtgaactggccgccaagcaccaggtcgccgaaggcgtcatc
gcgcgcctgggcggcttcatggacgtggaggccctgcgcgccatcgccgacggcgtggcc
ctggacctggacacggtcgaatcggccgaagccagcgccgtcaagctgcaggtctacctg
cgcgagctgcagaccaccggcgtgccggcggaagtggccggcgaattcgacgtgcgcacc
gacaagccggtgctgcgcatcagccgccgccaccacggcaacgtcaagagcagcgtgatc
acccaggacttcgtgcacggcgccgactacgaggccctggccctggccgccgccaccttc
aacggcctgctggccgacggcgccctggtgcgccgcggcgaaggcgagcgggccaaggaa
gaaaaggtcggcgacttccgcagcgccatgcgctggctgctgtccgaagccgaacgcgcc
accgcgcgccagcgctacaagggcctgggcgagatgaaccccgagcagctgtgggagacc
accatggatccaaacgtgcggcgcctgctgcgggtgcagatcgacgatgcgatcgaggcg
gatcgcgtcttcaccatgctgatgggcgacgaggtggagccgcgcagggagttcatcgag
acgaatgccttgcgggcgtcgaatatcgacgtttga
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