Xylophilus rhododendri: GT347_24915
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Entry
GT347_24915 CDS
T06383
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02020
Two-component system
xyk02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GT347_24915
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GT347_24915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xyk02035
]
GT347_24915
Bacterial motility proteins [BR:
xyk02035
]
Flagellar system
Chemotaxis proteins
MCPs
GT347_24915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cache_3-Cache_2
MCPsignal
sCache_3_3
dCache_2
sCache_2
HAMP
dCache_1
sCache_3_2
Sigma70_ner
DAHL
Motif
Other DBs
NCBI-ProteinID:
QHJ00944
UniProt:
A0A857JCL0
LinkDB
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Position
5384917..5386881
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AA seq
654 aa
AA seq
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MKFSDLDLSTKLPVVVFLVVSVVFAGFVIGISHSVSEMVNHRANVEVGEKTKLVVDLLDA
LDKDRRERTGELARSLQGKLAGSFELENPPAQADGTALPSLKLDGRPIDTDLELVDRFTA
DTGAVATVFARRGDDFVRVVTSLKNDKGQRSVGSLLARDHPAYKAILDGKAFIGFATLFN
RQYITQYDPIRDARGALIGISFVGLDISGYIKQLKSTVTSLKVGKTGYFYILDARPGATL
GTVVAHPDAEGKNLLEAKDADGRAYVQEIFERRNGTLRYRALDPAGGARERVVSFSSFGS
WQWVIAGGAYADEFTEEVRQLRNLYALLGVALVLLMTGLVYWLIRRLVIRPLGQASQAAQ
ALAQGDLSIDVRIERQDEIGRLLASINQIGRGLTDVVSTVRQGSEGVATASAQIAQGNQD
LSARTESQAGTLQQTAASMEELGTTVKQNADNARQANQLALSASTVAVQGGEAVAQVVQT
MQGIQDASRKITDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRGLAARS
ATAAKEIKTLIDDSVARVEQGSTLVDRAGATMQEVVSAIRRVTDIMGEISNASSEQSLGV
SQVGSAVTQMDQATQQNAALVEEMAAAADSLKTQAQALVSTVAVFKLSRQHATA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttccgatctggatctcagcaccaaattgccggtcgtcgtatttctggtcgtc
agcgtggtattcgccggctttgtgatcggcatcagccattcggtttccgaaatggtcaac
caccgggccaatgtggaagtcggcgaaaagaccaaactggtggtggacctgctggacgca
ctcgacaaggaccggcgcgagagaaccggcgaactggccagatccttgcaggggaaactg
gccggcagcttcgaattggagaatccgcctgcgcaagccgacggtactgcgctgccttct
ttgaaactcgacggccggcccatcgataccgacctcgaactggtggaccgcttcaccgcc
gacaccggcgccgtggcgacggtattcgcccggcgcggcgatgatttcgtgcgtgtggtg
acctcgctcaagaacgacaagggccagcgctccgtcggttcgctgctggcgcgcgatcac
ccggcctacaaggccatattggatggcaaggccttcatcgggttcgcgacgctgttcaat
cgccaatacatcacccaatacgaccctatccgcgatgcgcgcggcgcgctcatcggaatc
tccttcgtcgggctggatatctccggctatatcaagcagctgaaatccaccgtcaccagc
ctgaaagtcggcaagaccggctatttctacatcctggacgccaggcccggcgcgaccctg
ggcaccgtggttgcccacccggatgccgagggcaagaatctcctggaagctaaggacgcc
gacggccgtgcctacgtgcaggagatcttcgagcgccgcaacggcacgctgcgctaccgc
gcgctggatccggcgggcggtgcgcgcgagcgcgtcgtgtccttcagctctttcggcagt
tggcaatgggtgatcgccggcggcgcctatgcggacgagttcaccgaggaagtgcgccag
ctgcgcaacctctatgccctgctcggcgtcgccctggtgctgctgatgacggggctggtg
tactggctgatccgccgcctggtcatccgcccgctcgggcaggccagccaggcggcgcag
gcgttggcgcaaggcgacctgagcatcgatgtgcgcatcgagcgccaggacgagatcggc
cgcctgctcgcctccatcaaccagatcgggcgcggcctgacggatgtcgtcagcaccgtg
cgccagggctccgaaggcgtggctacggccagcgcccagatcgcccagggcaaccaggac
ttgtccgcccgcaccgagtcgcaggccggcacgctgcagcagacggcggccagcatggaa
gagctcggcaccaccgtcaaacaaaatgccgacaacgcccgccaggccaaccagctcgcc
ctcagcgccagcaccgtggccgtgcagggcggcgaagcggtggcgcaagtcgtgcagacc
atgcagggcatccaggatgcgtcgcgcaagatcaccgacatcatcagcgtgatcgacggc
atcgccttccagaccaatatcctggccctcaacgccgccgtggaagcggcccgcgcgggc
gagcagggccgaggtttcgcggtggtggcggccgaggtgcgtggcctggcggcacgttcg
gcgaccgcggccaaggagatcaagaccctgatcgacgacagcgtggcgcgtgtggaacaa
ggcagcacgctggtggaccgggccggcgccaccatgcaggaggtggtgagcgcgatccgc
cgcgtcaccgacatcatgggcgagatcagcaacgccagcagcgagcagagcctgggtgtc
agccaggtcggcagcgcggtcacgcagatggatcaggccacgcagcagaacgctgcgctg
gtcgaggagatggccgcagcggcggacagcctgaagacccaggcgcaggcgctggtgagt
acggtggcggtgttcaagctgagccggcagcacgccacggcctga
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