Salipiger sp. CCB-MM3: AYJ57_07855
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Entry
AYJ57_07855 CDS
T04443
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
yan
Salipiger sp. CCB-MM3
Pathway
yan03030
DNA replication
yan03430
Mismatch repair
yan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYJ57_07855
03430 Mismatch repair
AYJ57_07855
03440 Homologous recombination
AYJ57_07855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yan03032
]
AYJ57_07855
03400 DNA repair and recombination proteins [BR:
yan03400
]
AYJ57_07855
Enzymes [BR:
yan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYJ57_07855
DNA replication proteins [BR:
yan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYJ57_07855
DNA repair and recombination proteins [BR:
yan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYJ57_07855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ANT60284
UniProt:
A0A1B1PNX5
LinkDB
All DBs
Position
1:1624266..1625384
Genome browser
AA seq
372 aa
AA seq
DB search
MKVSIERATLLKAVSQAQSVVERRNTIPILANVLIEAEGNTASFRATDLDIEVLDRAPAV
VEQAGATTVSAVTLHEIVRKLPDGALVQLAADNAAGRLTVTAGRSNFSLATLPKEDFPVM
ASSEYSSNFSAKAEVLRRLFDKSKFAISTEETRYYLNGVYMHVTDSEDGRVLRCVATDGH
RLARIDAPLPSGAEEMPGVIVPRKTVGELRKLLDEDDMDIAVSVSETKVRFATPDITLTS
KVIDGTFPDYSRVIPMNNTRRLEVDAGEFAKAVDRVATVSSERSRAVKLQLDEDRLVLSV
NAPDSGAAEEELAVAYGDEPLEIGFNAKYLLEIASQVDRENAVFMFNSSGDPTLMREGTD
TSAVYVVMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagcatagaacgggcgacgctgctcaaggcagtcagccaggcacaatcggtg
gtcgaacgccggaacaccattccgatccttgcgaacgtgctgatcgaggccgaagggaac
acggccagcttccgcgcgaccgatctcgatatcgaagtgctcgaccgcgcccccgcggtt
gtcgagcaggcgggcgccaccaccgtctcggcagtgaccctgcacgaaatcgtgcgcaag
ctgcccgacggcgcgctggtgcaactggccgccgacaatgccgcaggccggctgacggtg
accgcgggccgttcgaacttcagcctcgcgacgctgccgaaagaagacttcccggtcatg
gcgtcgtcggaatattcgtcgaacttcagcgccaaggccgaagtgctgcgccggctgttc
gacaagtcgaagtttgccatctcgaccgaagagacgcgctattacctcaatggcgtctat
atgcatgtcaccgacagcgaagacggccgcgtgctgcgctgtgtggccaccgacggtcac
cgccttgcgcgtatcgacgcgccgctgccgtcgggcgccgaagagatgcccggcgtgatc
gtgccgcgcaagaccgtgggcgagctgcgcaagctgctcgacgaagacgatatggacatc
gcggtctcggtctcggaaaccaaggtgcgcttcgccacgcccgacatcacgctgacctcc
aaggtcatcgacggcaccttcccggattattcgcgcgtcatcccgatgaacaacacccgc
cgcctcgaggtcgacgcgggcgagttcgccaaggcagtggaccgtgtggcaaccgtctcg
tcggaacgctcgcgcgcggtgaagctgcagctggatgaagaccgcctcgtgctttcggtc
aacgcccccgacagcggtgccgccgaagaagagctggccgtggcctatggcgacgagccg
ctggagatcggcttcaacgcgaaatacctgctggagatcgccagccaggtcgaccgtgag
aacgccgttttcatgttcaattcctccggcgatccgaccttgatgcgcgaaggcaccgac
acgtcggcggtctatgtcgtcatgccgatgcgggtctga
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