Yersinia alsatica: N0H69_00550
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Entry
N0H69_00550 CDS
T08521
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
yas
Yersinia alsatica
Pathway
yas00040
Pentose and glucuronate interconversions
yas01100
Metabolic pathways
yas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
N0H69_00550
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N0H69_00550
Enzymes [BR:
yas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
N0H69_00550
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
UWM45389
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Position
133272..134990
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AA seq
572 aa
AA seq
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MKKRALFLSMAALAALYIPAGQAADTDRLTVVKQYVDNVLNKASDTYHGDKPSPLLADGV
DPRTGQQLEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDERYQKRAEDIVRYHFQNY
QDPSGLLYWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDSDATARFIRGFW
NAHVYDWRILETSRHGEYGKPMGELWKSQFEQQPPFFATKGLSFLNAGNDLIYSASLLYK
HQQDQGALVWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPAALEGNMMLKGRTSTLYSENALMQLQLGKDLGPQGQDLLKWTVDGLKAFAKYAY
NDQDNTFRPMIADGQDLSNYTLPRDGYYGKKGAVLKPYKAGNEFLISYARAYAIDNDPLL
WKVARGIANDQGLGDIGTAPGKDVKVKLDTTNSDPYAVFALLDLYSASQVADYRLLAEKI
GDNIIKTRYIDGFFMASPDRQYADVDAIEPYALLALEASLRNKPQAVAPFLNGAGFTEGA
YRMDDGSARISTRDNELFLLNVGEKLQPNGRK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagagcgttatttttgagtatggcggcgctggcagcgctgtatatacccgcc
ggacaggccgcggatactgaccgcctcactgtggtaaagcagtatgtcgataatgtgctc
aataaggcatcagatacttaccacggtgataagcccagcccgctattggcggatggtgtt
gacccccgtaccgggcagcaattggagtggatattccccgatggccgccgggcagtatta
tcgaacttctctgctcaacaaaatctgatgcgcgtgatgagtggcttaagccagttgagt
ggcgatgagcgttatcagaaacgggctgaagatattgttcgttatcatttccaaaactat
caagatccaagtggtttactttattggggcggccaccgatttgttgatttaaaaacactg
caacccgaagggccaagtgaaaaagagatggtgcatgagctgaaaaatgcctatccctac
tatgacctgatgttcagtgtcgacagtgacgccaccgctcggtttattcgcggcttttgg
aatgcccatgtttatgactggcgcattcttgaaaccagccgccacggcgagtatggcaag
ccgatgggggagttgtggaaaagtcagtttgagcagcaaccgccgttcttcgccactaaa
ggcctgagttttctgaatgcgggtaatgacctgatttattcggcgtccttactctacaag
caccagcaagaccagggcgcactggtatgggctaagcgtttggccgatcaatatgtattg
ccgcgcgatgccaaaaccggcttgggggtgtatcagtttactcaagctctgaaacgtgaa
gagccaaccgatgacgccgacacccattccaagtttggtgatcgtgctcagcgccaattt
gggcccgagtttggcccggcagcactggaaggcaatatgatgctcaaagggcgcaccagt
accctttattctgaaaatgccttgatgcagttgcagttgggtaaagatttagggccgcag
gggcaggacttactgaagtggacggtggatggcctgaaagcttttgctaaatatgcttat
aacgatcaggacaatactttccgcccaatgatcgctgacgggcaggatctatcgaattac
accctcccgcgtgatggttattacggtaaaaaaggtgcggtactcaagccgtacaaagct
ggcaatgaattcctgatttcctatgcgcgtgcttacgccatcgataatgacccattactg
tggaaagtcgctcgcggtattgccaacgaccaggggctgggtgatatcggtactgcaccg
ggtaaagatgtgaaggtcaagttggacaccaccaacagtgacccatacgcggtgttcgct
ttgctcgatctctatagtgccagtcaggtcgctgattaccggctattggcagagaaaatc
ggcgataacatcattaaaactcgctatatcgatggcttctttatggcatctcccgatcgt
caatatgccgatgttgacgcgatagaaccttacgctttactggcactagaggcctcacta
cgtaataaaccacaggcagttgcacctttccttaatggtgctggatttaccgaaggtgct
taccgaatggacgatggttcagcacggatctcaacccgtgataatgaactgttcttgctc
aatgtgggtgagaagctgcaaccgaacggccgtaaatag
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