KEGG   Yersinia alsatica: N0H69_06920
Entry
N0H69_06920       CDS       T08521                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
yas  Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:yas00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yas02044]
    N0H69_06920 (tssC)
Secretion system [BR:yas02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   N0H69_06920 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UWM46548
LinkDB
Position
1582036..1583589
AA seq 517 aa
MLMSVQENAAQGSATTVLEKNRPVAQGVYASLFEKINLSPVSSLTRLDAFQNNDALAEAT
TDERVTAAVSVFLDLLKQSSRKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVES
GWRGLKFLVDRTDFRQNVKIELLDVSKEDLRQDFEDCPEIVQSGLYRHTYIQEYDTPGGE
PIGSVISNYEFDAGPQDVALLRNISKVSAAAHMPFIASVGPKFFLKDSMEEVAAIKDIGN
YFDRAEYIKWKSFRDSDDARYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYL
WANASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPE
TREFEFANLGFIPLSYYKNRDYSCFFSANSTQKPALYETADATANSRINARLPYIFLLSR
IAHYLKLIQRENIGTTKDRRLLELELNNWVRSLVTEMTDPGDDLQASHPLRDAKVTVEDI
EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtacaggaaaatgctgcgcagggtagtgcgacgaccgtattagagaag
aaccgccccgtcgcccagggggtttatgcctcgctgtttgaaaaaatcaatcttagccca
gtgtcatcactgacccgtcttgatgcttttcaaaacaacgatgcactggcagaagccaca
accgacgagcgtgttaccgctgcggtcagcgtctttttagacttgttgaaacagtcgtct
cgaaaagtagaaaaactggataaaaccttactggatggccacattgcagcactggacgac
caaatcagtcgccagctagatgcggtaatgcatcaccctgatttccagcgtgtagagtct
ggctggcgtggccttaagttcctggttgaccgcactgattttcgtcagaatgtcaaaatt
gaactgctggacgtgtcgaaagaagacttacgtcaggacttcgaagattgcccagaaatt
gtccagagtggcttatatcgccatacctatattcaggaatatgacacaccaggtggcgag
cctatcggttcggttatttctaactatgagtttgatgccggtccgcaagatgtcgcgcta
ttacgcaacatttctaaagtttctgctgcggcacatatgccatttatcgcctctgttggc
cctaaattcttcctcaaagactccatggaagaagtggctgccatcaaagatatcggcaac
tactttgatcgcgcggaatacatcaaatggaaatcgttccgcgactctgacgatgcacgc
tatatcggcttgactatgccgcgtgtattaggtcgtctgccttatggccctgatactgtg
ccagtacgtagctttaattacgtcgaagaagtgaaaggcccggatcatgaaaaatatctg
tgggcgaatgcgtcttttgcgtttgcggccaacatggtgaaaagcttcatcaaaaatggt
tggtgcgtacagattcgtggtccacaagcgggtggtgctgtaactgacttgccgattcac
ctgtacgatttgggcaccggtaatcaggtgaaaatcccgtcagaagtgatgatcccggaa
acgcgcgagtttgagtttgccaatctgggctttatcccactgtcttactacaaaaaccgt
gattactcttgcttcttctcggctaactctacccagaagccagcattgtatgaaacggcg
gatgcgacagccaacagccgcatcaatgcccgtctgccgtacatcttcctgctgtcacgt
attgctcattacctgaagttgatccaacgcgaaaatatcggcaccaccaaagatcgccgt
ttgttggagttggagctgaataattgggtacgcagtctggtcactgagatgactgatccg
ggcgatgatttgcaggcttctcatcctctgcgtgatgcaaaagttacagtagaagatatt
gaagacaacccaggtttcttccgcgtcaagctgtatgccgtaccacacttccaggtggaa
ggtatggacgtcaatctgtcgttagtctcgcagatgccgaaggctaaagcttaa

DBGET integrated database retrieval system