Yersinia alsatica: N0H69_19955
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Entry
N0H69_19955 CDS
T08521
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yas
Yersinia alsatica
Brite
KEGG Orthology (KO) [BR:
yas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yas03400
]
N0H69_19955 (sbcD)
DNA repair and recombination proteins [BR:
yas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N0H69_19955 (sbcD)
Archaeal homologous recombinant proteins
N0H69_19955 (sbcD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
UWM44885
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Position
4408392..4409630
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQHFFTKSRAAEHQAFLHWLIEQIEDNQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVELQPTGCQLVVLGGNHDSVSTLNESRGLLSYLNTTVISCASSHLDQQIIILK
DRQHQPAALLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAAHYQALYQRAVERRSELN
LPLPIIATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFTQQTLSSVTPLFIPQFQPMQLVKGDLPQIEQQLA
KFADHQGLPVWLDIEVATQDYLTDIQRRIQALTAELPVEVVLLRRSKEQRNIGIDRQEKE
TLNELSVSDVFERRLALEADLAEPRQQRMRQMFHQVIEDVTQGKDAAEEQSI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacctctgactggcatttaggccaacatttcttcaccaaaagccgt
gctgctgaacatcaggcttttttgcattggcttattgagcaaattgaagataatcaggtg
gatgcgctaatcgttgccggtgacatatttgatactggctcgcctcccagttatgcccgc
gagctttataatcgttttgtggtcgagctccaacccactggctgccagttggtggtgctg
ggggggaaccacgattcagtctcaacactgaatgaatcacggggtttgctttcctatcta
aataccactgtaatttcctgtgccagcagccatctggatcagcaaatcattattctgaaa
gaccgccagcaccagcccgcagcactgctgtgcgccattccttttctacgaccccgtgat
ttagtgaccagtcaggcaggtgaatctggcgggcaaaagcaactggcattgcaagaagca
atcgcggctcactatcaggcgctatatcagcgagctgttgaacggcgttccgagctaaat
ttacccttaccgattatcgccaccgggcacctgactactgttggtgtgacgaccagtgac
tcggttcgcgatatttatatcggcacattggatgctttcccggcgcaagctttccctcct
gcggattatattgctttgggtcatatccatcgtgctcagcaagtggccaaaactgaacat
attcgttacagcggctcgccaatcgccttgagttttgatgagttaagcaaggagaaaagc
gtctatctggtggaatttacgcaacaaacattgtcgtcagttaccccactgtttattcca
caatttcagccaatgcagctagtcaaaggtgatttaccgcagatagagcaacagttggct
aaattcgctgaccaccaaggtttaccggtatggttggatatcgaggttgccactcaagac
tatctcactgatatccaaagacgaattcaagcactaactgcggaactcccagttgaagtg
gtgttattacgccgcagtaaagagcaacgcaatatcggaatagaccggcaagaaaaagag
accctcaatgagctgagtgtgtctgatgtatttgagcgcagactggcactggaggccgat
ttagccgagccgcgccaacagcgtatgcgccaaatgtttcatcaagttattgaagacgta
acgcaaggcaaagatgccgcagaggagcaatctatatga
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