KEGG   Yersinia enterocolitica (type O 5) YE53/03: YE5303_36211
Entry
YE5303_36211      CDS       T03739                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
yee  Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00740  Riboflavin metabolism
yee01100  Metabolic pathways
yee01110  Biosynthesis of secondary metabolites
yee01240  Biosynthesis of cofactors
yee02024  Quorum sensing
Module
yee_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:yee00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    YE5303_36211 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YE5303_36211 (ribD)
Enzymes [BR:yee01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     YE5303_36211 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     YE5303_36211 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CCQ41670
LinkDB
Position
complement(3628808..3629917)
AA seq 369 aa
MQPDEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMA
GEKARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAG
VDVDHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQD
VQRFRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALCQPVRIIVDSHNRVT
PQHKVIQQDGPCWLARVEADEQSWPNNVEQLLLPRHGNGVDLVLLMMQLGKRQINSVWVE
AGPQFAGALLQAGVVDELILYIAPKLLGSDTRGLCQLTGLTQLSDAPEFVFSEVRQVGPD
LRLRLKPKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcagcccgatgaattctatatggcccgtgcctttgagttggcgcggctagggcgtttt
accacgtcaccgaaccctaatgtcgggtgtgttctggtgcgcgatggcgagattgtcggt
gagggctatcatttgcgtgctggcgaacctcatgccgaggtgcatgctttacggatggcg
ggtgagaaagcgcgtggagcgactgcctatgttacccttgagccatgtagccaccacggg
cgtacgccaccctgtgctgatgctttgcttactgccggtgtaaaacgcgtggtagccgcg
atgcaggaccctaatccgcaagttgccgggcgcgggttatataaattaaaacaggctggg
gttgacgttgaccacggtttgatgctggcggaagccgaagcggttaatctcggtttcttg
aaacggatgcgcactggctttccttatctgcaattgaaaatggctgcatccctggatggc
cgcaccgcaatggcctcgggtgaaagccagtggattacctcgccacaagcgcgtcaggat
gtgcagcgttttcgggcgcaaagctctgctatccttagcaccagtgccaccgtattggct
gatgatcctgcgctaaccgtgcgctggcaggagctggatgcacaaacccaggcgctgtac
cctcaagatgcactgtgccagccggttcgaattattgtcgatagccataaccgcgtgacg
ccacagcataaagtcatacagcaagacggcccgtgttggttagctcgagttgaggcagat
gagcagtcatggcctaacaatgtcgagcaattgttgctaccacgtcatggcaatggggtg
gatttagtcttattaatgatgcaattaggtaagcggcaaattaattctgtttgggttgaa
gccgggccacaatttgcgggcgcgcttttgcaggcgggtgtggttgatgagctaattctg
tatattgcgccaaaattgttaggcagcgatacccgtgggttatgccagttgactgggtta
acgcaactaagtgatgcccctgaattcgtattcagtgaggttcgtcaggtgggaccagac
ttacgtctgcgcttgaaaccgaagtattaa

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