Yersinia enterocolitica 2516-87: CH48_3336
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Entry
CH48_3336 CDS
T03644
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
yet
Yersinia enterocolitica 2516-87
Pathway
yet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH48_3336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yet03400
]
CH48_3336
Enzymes [BR:
yet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CH48_3336
DNA repair and recombination proteins [BR:
yet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH48_3336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJJ28480
LinkDB
All DBs
Position
complement(3705701..3706303)
Genome browser
AA seq
200 aa
AA seq
DB search
MFYSYGETEINHLKRRDKKMAAAIERLGMIARPLSPDLFAALIRNIVDQQISVKAALTVN
ARLMTLVGTVTPITIAAAPIEAIQGCGMTMRKAGYIKGAANAALDGSLDLSAISLLPDNE
VIDQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRERFERYRR
RYTPYGTTASLYLWALSHEV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
gtgttctacagttacggtgaaacagagataaatcatcttaagcggcgggacaaaaagatg
gcggcggctatcgagcgattaggaatgattgcccgtccattatcaccagatttatttgct
gcactcatcagaaacattgttgatcagcaaatttctgttaaagcggcactcaccgttaat
gcacgtctgatgacattagtcggcacggtaacaccaataactattgccgcagcaccgata
gaagcgattcagggctgcggaatgacgatgcgcaaagccggatatattaaaggtgcagcg
aatgcagcacttgatggatctcttgatttatcagctatttctttgttaccggataatgag
gtcattgaccagctttcgagcctgaatggtatcggtatctggactgcagaaatgctactt
atttcttcactttctcgccctgatgtgctcagttggggtgatttggcgatccgccgcggc
atgatgaatttatatcgccacaaaacgctaccgcgcgaacgttttgaacgctatcgccgc
cgctatacgccttatggcaccaccgcatctctttatttatgggcattgtcgcatgaagtt
tag
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integrated database retrieval system
