Yersinia enterocolitica WA: CH47_2847
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Entry
CH47_2847 CDS
T03643
Name
(GenBank) RNA pseudouridylate synthase family protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yew03009
]
CH47_2847
03016 Transfer RNA biogenesis [BR:
yew03016
]
CH47_2847
Enzymes [BR:
yew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CH47_2847
5.4.99.29 23S rRNA pseudouridine746 synthase
CH47_2847
Ribosome biogenesis [BR:
yew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH47_2847
Transfer RNA biogenesis [BR:
yew03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CH47_2847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DinI
Motif
Other DBs
NCBI-ProteinID:
AJI82899
LinkDB
All DBs
Position
3075516..3076169
Genome browser
AA seq
217 aa
AA seq
DB search
MEPYNPPRDPWLQILYQDEHIMVVNKASGLLSVPGRAPENKDSVMTRIQADFPSAESVHR
LDMATSGVIVVALTKAAERELKRQFREREPKKSYVARVWGHLAQDEGLIDLPLICDWPNR
PKQKVCYETGKSSQTQYQVLSRDADGSTRVKLSPITGRSHQLRVHMLAIGHPILGDGFYA
HPEAKVMASRLQLHAQELCITHPEFGTVMHFKCEPEF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctataatcccccacgcgatccttggctacaaatcctgtatcaggatgagcac
atcatggtggtcaataaagccagtggtttgctgtccgttccgggccgcgcgccagagaat
aaagatagcgtgatgacccgcattcaggccgatttcccgagcgcggagtctgtgcaccga
ttagatatggcgaccagtggcgtgattgtggtggcgctgactaaagcggctgagcgtgag
ttaaagcggcaatttcgtgaacgcgagccgaaaaagtcttatgtggcgcgggtatggggc
catctggcgcaagatgaagggttgatcgatttgcctttaatttgcgactggccgaatcgg
ccaaagcagaaagtgtgttatgaaaccggtaaatcctcgcaaactcagtatcaggtgcta
tcacgggatgctgacggcagtacgcgagttaagttatcccccatcaccggccgctcacat
cagttacgggtacatatgctggcgataggtcaccctattcttggtgatggcttctatgcc
catcccgaggctaaagtaatggcatcccggttacagttgcatgcgcaagaattatgtatt
actcatccagagtttgggacagtgatgcattttaaatgcgagccagaattttga
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