Yersinia frederiksenii: AW19_60
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Entry
AW19_60 CDS
T03606
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
yfr
Yersinia frederiksenii
Brite
KEGG Orthology (KO) [BR:
yfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yfr03009
]
AW19_60 (rluD)
Enzymes [BR:
yfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AW19_60 (rluD)
Ribosome biogenesis [BR:
yfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AW19_60 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
S4_2
Motif
Other DBs
NCBI-ProteinID:
AJI88658
LinkDB
All DBs
Position
58242..59219
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AA seq
325 aa
AA seq
DB search
MAQQVQLSATVAESQLGQRLDQALAELFPDYSRSRIKEWILEDRVTVDGKTINKPKEKVL
GGELVAIDAQIEEDARWAPQEIPLDIVYEDNDILVINKPRGLVVHPGAGNPDGTVLNALL
YYYPEIMDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQAREITREYEAVAIGNMT
AGGRVDEPISRHSTKRTHMAVHPMGKPATTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
SHINHPLVGDQLYGGRPRPPRGASDSFIAILRGFDRQALHATMLRLYHPISGIQMEWHAA
LPDDMVELINALKADTEEFKDQMDW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagtacaactcagcgcaacggtggccgaatcacaactcggtcaacggtta
gatcaggctttggccgaattgttccctgattattcaagatctcgcataaaagaatggatc
ttggaagaccgagtcactgtcgacggtaaaacaattaacaaacctaaagaaaaagtgttg
ggtggcgagctcgtcgcaattgacgcgcaaattgaggaagatgcccgctgggcgcctcaa
gaaatcccactggatatcgtctatgaagataacgatattctggttattaataaaccccgc
ggtttagtggtgcaccctggggccggtaatccagatggcacagttctgaatgcattgctc
tattattatccagaaatcatggatgtaccacgggcaggtatcgtacatcgcctggataaa
gataccaccggcttgatggtggtggcgaaaactgttccggctcagactcgcttggttgaa
gcactgcaagcacgcgaaattacccgtgaatacgaagctgtggccatcggcaatatgacc
gctggcggcagagttgacgagcctatttctcgtcactccaccaagcggacacacatggcg
gtgcatccgatgggtaaaccggcgacaactcactaccgtattatggagcacttccgtgcc
catactcgtctgcgcttacgtttagagacgggccgtacgcaccagatccgcgtgcatatg
tcccatatcaaccatccgctggtgggtgatcagctttatggtggccgcccgcgcccacca
cgcggcgcatcggactcctttattgctattttgcgtggctttgaccgccaggcgctgcat
gcaactatgctgcgtttgtatcatcctatcagtggcattcaaatggaatggcatgcggca
ttaccagacgatatggttgagctgattaatgcgctgaaagctgataccgaagaattcaaa
gatcagatggattggtaa
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