Yinghuangia sp. ASG 101: LO772_04825
Help
Entry
LO772_04825 CDS
T07749
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
yia
Yinghuangia sp. ASG 101
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
DUF6292
Motif
Other DBs
NCBI-ProteinID:
UGQ12948
LinkDB
All DBs
Position
1208489..1209496
Genome browser
AA seq
335 aa
AA seq
DB search
MSSAEQIEIDGRSVRVTNVDKVYFPERGFTKGDVVRYVLSVGEGMLRAFGNRPTTLERYP
DGVGGESFYQKRVPKYRPEWIRTARIRFPSGRTADELCPDGTASLVWAANLGCLTFHPWP
VRRGDTEHPDELRIDLDPQPGTGFADAVRAAHEMRAVLGEYGLTAWPKTSGGRGLHLFVP
IRPAWPFVDVRRAVIALGRELESRMPDQVTTAWWKEERGRRVFVDYNQMARDRTIAAAYS
PRANQRATVSAPLTWDEVDDARPDDFDLATMPERFARLGDVHADMSEHAFSLDSALALSD
RQARDSGSGDLPYPPDHPKMPGEPPRVQPSRARNS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgccgaacagattgagatcgacggtcggtccgtccgggtcaccaacgtcgac
aaggtgtactttcccgaacgcggtttcaccaagggcgacgtcgtccgctacgtcctgtcc
gtgggcgaggggatgctccgcgcgttcggcaaccgccccacgaccctggagcgctacccc
gacggcgtcgggggcgagtcgttctaccagaagcgcgtgccgaagtaccggccggagtgg
atccggacggcccggatccgcttcccgagcgggcgcaccgccgacgagctgtgccccgac
ggcaccgcctcgctggtgtgggcggcgaacctgggctgcctgacgttccacccgtggccc
gtgcggcgtggcgacaccgagcaccccgacgagttgcgcatcgatctcgacccgcagccc
ggcacggggttcgccgacgcggtgcgtgcggcccacgagatgcgcgcggtgctcggcgag
tacggcctgaccgcgtggcccaagacgtcgggcgggcgcggcctgcacctgttcgttccc
atccgcccggcgtggccgttcgtcgacgtgcggcgtgcggtgatcgcgctgggccgggag
ttggagtcccgcatgcccgaccaggtgaccacggcgtggtggaaggaggagcgcgggcgg
cgggtgttcgtggactacaaccagatggcccgggaccggacgatcgccgccgcgtactcg
ccgcgggcgaaccagcgcgcgaccgtctcggccccgctgacgtgggacgaggtcgacgac
gcgcggccggacgatttcgacctggccacgatgccggagcgcttcgcgcggctaggcgac
gtgcacgcggacatgtccgagcacgctttctccctcgactccgctctcgcgctgtccgac
cgccaggcgcgggacagcggttcgggcgacctgccctatcccccggaccacccgaagatg
cccggggagccgccgcgcgtccagccgagccgtgcgcgcaactcgtag
DBGET
integrated database retrieval system
