Yinghuangia sp. ASG 101: LO772_18015
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Entry
LO772_18015 CDS
T07749
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
yia
Yinghuangia sp. ASG 101
Pathway
yia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LO772_18015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yia03019
]
LO772_18015
Enzymes [BR:
yia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LO772_18015
Messenger RNA biogenesis [BR:
yia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LO772_18015
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UGQ15476
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All DBs
Position
4206547..4207974
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AA seq
475 aa
AA seq
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MPSDRLNHVQRRAVAELLRVAPVADDLARRFEAAGHRLALVGGSVRDALLGRLGNDLDFT
TDARPEQILAIVRPWAEAVWEVGIAFGTIGCRKQDFQIEVTTYRSEAYDRASRKPEVSYG
DAIEDDLVRRDFTVNAMAVDLPGVTFVDPYGGLDDLATRVLRTPGTPEASFGDDPLRMMR
AARFAAQLDFEVAPEVVAAMTAMADRIDIVSAERVRDEFNKLVCSPHPRKGLLLLVETGI
AARIMPELPLLRLELDEHHRHKDVYEHTLTVLEQAMDLEEPGEPDLVLRLAALLHDIGKP
RTRRFEDDGRVSFHHHEVVGAHMTKKRMKALKYPKDVTDEVTRLVELHLRFHGYGTGEWT
DAAVRRYVRDAGPLLDRLHKLTRSDCTTRNRRRAAALARAYDSLEERIARLQEQEELDAI
RPDLDGNEIMRVLGVPPGPLVGRAYKHLLELRLENGPMDHETAVAELRSWWAEQS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtccgaccgtctcaaccatgtccagcgccgcgcggtggccgaactgctgcgcgtc
gccccggtcgcggacgacctcgcacgcaggttcgaggccgccggtcaccggttggccctc
gtgggcggctcggtacgcgacgcactcctcggccggctcggcaacgacctcgacttcacc
accgacgcccgccccgagcagatcctcgcgatcgtgcgcccgtgggccgaggccgtctgg
gaggtcggcatcgccttcggcaccatcggctgccgcaagcaggatttccagatcgaggtc
acgacctaccgctcggaggcgtacgaccgcgcgtcccgcaagccggaggtgagctacggc
gacgcgatcgaagacgacctggtgcgccgcgacttcacggtgaacgcgatggccgtcgac
ctgccgggcgtcacgttcgtcgacccctacgggggtctggacgacctcgcgacgcgcgtt
ctgcgcacccccggcacccccgaggcgtcgttcggcgacgacccgctgcgcatgatgcgc
gcggcccgcttcgccgcccagctcgacttcgaggtcgcccccgaggtcgtcgccgcgatg
accgcgatggccgaccggatcgacatcgtctccgccgagcgcgtgcgcgacgagttcaac
aagctcgtctgctcgccgcacccgcgcaagggcctgctgctgctcgtcgagaccggcatc
gcggcccggatcatgccggaactgccgcttctgcgcctggagttggacgagcaccaccgg
cacaaggacgtgtacgagcacaccctgaccgtgctggaacaggcgatggacctcgaagag
ccgggcgagcccgacctcgtgctgcgcctcgcggcgctgctgcacgacatcggcaagccg
cgcacacgtcgtttcgaggacgacggccgggtgtcgttccaccaccacgaggtggtcggc
gcgcacatgaccaagaagcgcatgaaggcgctcaagtacccgaaggacgtcaccgacgag
gtgacgcgcctggtggagctgcacctgcgcttccacggctacggcacgggcgaatggacc
gacgccgccgtgcgccgctacgtgcgcgacgccgggccgctgctcgaccggctgcacaag
ctgacccgctcggactgcacgacgcgcaaccggcgccgggcggcggcgctcgcccgggcg
tacgactcgctggaggagcgcatcgcgcggctccaggagcaggaggaactggacgcgatc
cggccggacctggacgggaacgagatcatgcgcgtcctcggcgtgccgccggggccgctg
gtcgggcgggcgtacaagcacttgctcgaactgcggctggagaacgggccgatggaccac
gagacggcggtcgcggagctgcggtcgtggtgggcggagcagagttga
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