Yersinia intermedia: CH53_3524
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Entry
CH53_3524 CDS
T03608
Name
(GenBank) bacterial regulatory s, lacI family protein
KO
K27069
LacI family transcriptional regulator, lactose operon repressor
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yin03000
]
CH53_3524
Transcription factors [BR:
yin03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CH53_3524
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_10
HTH_Crp_2
HTH_3
THF_DHG_CYH
HTH_26
MarR_2
HbpS-like
HTH_AraC
HTH_23
Polysacc_deac_2
HTH_31
HTH_35
TnsD
TrmB
Motif
Other DBs
NCBI-ProteinID:
AJJ19820
UniProt:
A0A0T9LYC6
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Position
complement(3932313..3933347)
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AA seq
344 aa
AA seq
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MRPKSVTLDDVARQAGVSYQTVSRVLNQAPHVSPKTRSKVEQAMADLNYVPNRVAQQLAG
KHSLTLGLATTDLALHAPSQIAAAIKSKARELGYAVVIAMVDDQTAPACQQAINELLAQR
VDGILVNIPLKPKASAIIAQQCADTPVLFLDVDPQSTAFSVLFDAKVGAIQGAGHLITLG
HQQIAFICGPKSAISAQLRYQGWLQALNDASLTPQAVYYGEWNARSGYQATQRLIASNIP
FSAILVANDQMALGVLRALHEHNINVPAQVSVIGYDDTADSAYFQPPLTTIRQDFKQLGE
ESVSRLIVRLHHTIEPPSGSLLLATELTIRQTTARFKRSILKNK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctaagtctgtcactttagatgatgtcgcacgccaggcgggagtgtcatatcaa
accgtatcacgtgttttaaaccaagcacctcatgtctcaccaaaaacccgcagcaaggtc
gaacaggccatggctgacttaaactatgtccctaaccgtgtagcacagcaattggcaggg
aaacatagccttacgcttgggctggcaaccacagacctcgcgttacatgccccctctcaa
atagccgcagcaataaaaagtaaagcgcgtgagctaggatacgcagtagtgattgccatg
gtcgatgatcaaactgcccctgcttgccagcaagcgataaatgaactgctagcccaacgg
gttgatggcatcttagtgaatattcctctgaaacctaaagccagtgcgataattgcccag
caatgtgcggatactccggtattgtttctggatgtggatccacaatccaccgctttcagt
gtgttgtttgacgccaaggttggagccattcagggagctgggcacctcattaccttaggc
caccagcagattgcctttatctgtgggccgaaaagcgcgatttcagcccagttacgttat
cagggctggctacaggcactcaatgacgcctcgttaacccctcaggcggtctactacggc
gaatggaacgcccgaagcggctatcaggccacacagaggctcattgccagcaatattcct
tttagcgctatattggtcgctaacgatcaaatggctcttggtgtattacgcgcgctgcat
gagcacaatatcaacgtgccagcgcaagtctcggtcattggttacgatgacaccgcagac
agcgcctatttccaaccgccactgacaacgatcaggcaggacttcaagcaattaggggaa
gagagcgtttcccgcctgattgtcaggctgcaccacaccattgagccaccgtctgggtct
ctcttgttagccactgaactgacaatacgccaaacaacagcacgctttaagcgctctatc
cttaaaaacaaataa
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