Yersinia kristensenii: HRD70_08750
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Entry
HRD70_08750 CDS
T08672
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
yki
Yersinia kristensenii
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yki03016
]
HRD70_08750 (truD)
Enzymes [BR:
yki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HRD70_08750 (truD)
Transfer RNA biogenesis [BR:
yki03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HRD70_08750 (truD)
Prokaryotic type
HRD70_08750 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKJ15261
LinkDB
All DBs
Position
1983738..1984787
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AA seq
349 aa
AA seq
DB search
MDMDNLTWLHGKPKANGVLKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLATFELEGCEVLESVRQKRKL
RIGSLKGNAFTLVLRHITDNQDVEQRLQQIAVHGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSSRLAQQQATTVLEGDALQLSGRGSWFVAGADEL
PLLQQRVDAGELNVTAPLPGDGELGTQGAALAFEQASLADQTELLALIKRERVEGARRAI
LLKPQNMTWNWWDEVTLELNFWLPAGSFATSVVREIMNQDNADAADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggacaatctaacctggctgcacggtaaacccaaggcgaatggtgttttaaaa
gccaatccggaagatttcgtggtagtcgaagacttgggatttgagccggatggcgaaggc
gagcatctattggtgcgtatccgcaaaaatggctgtaacacccaatttgtcgcggattat
ctggcgcgtttcgccaagattcacccgcggctggtgagctatgcgggcttgaaagatcgc
cacgccgttaccgagcagtggttctgtttacacttaccgggtaaagaagcacctgatctt
gctactttcgagttagaaggttgtgaagtgctggagtctgtgcgccagaaaagaaaactg
cgtattggttcactgaaaggcaatgcttttactttggtgttgcgccacatcactgataat
caggatgtcgaacagcgattgcagcagattgccgtgcatggtgtaccgaactattttggt
agccagcgttttggtcgtggtggcaataatctggtgcaggcgcgcttgtgggcgaacaat
gaaattcgggttaaagagcgcagcaagcgcagcttttacttatccgccagccgcagcgct
atgttcaacctgattagcagtagccgtttagctcaacagcaagctacgacggtactggaa
ggtgatgccttgcagctatcgggtcgcggcagttggtttgtggccggggctgatgaattg
cccttgttacaacagcgggtcgatgcgggggaattgaatgtgaccgctccgttgccgggt
gatggcgagctgggcactcagggcgcggcattagctttcgagcaagccagtttagcggat
caaaccgagttactggcactgattaagcgcgaacgtgttgaaggtgcacgtcgggcaatc
ttattaaaaccgcaaaatatgacgtggaactggtgggatgaggtcacgctggaactcaac
ttctggttacccgctggcagctttgctaccagtgtggtgcgggaaatcatgaatcaggat
aatgccgatgctgcggatattgctgagtaa
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