Yersinia rochesterensis: CH54_1724
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Entry
CH54_1724 CDS
T03609
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00550
Peptidoglycan biosynthesis
ykr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH54_1724 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ykr01003
]
CH54_1724 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
CH54_1724 (mrcB)
Enzymes [BR:
ykr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CH54_1724 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CH54_1724 (mrcB)
Glycosyltransferases [BR:
ykr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CH54_1724 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ykr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CH54_1724 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Rad54_N
Motif
Other DBs
NCBI-ProteinID:
AJJ37219
LinkDB
All DBs
Position
complement(1856791..1859280)
Genome browser
AA seq
829 aa
AA seq
DB search
MSGDDREPIGRKGKKAQPKVASKRPLRRRRDEDEYEEEDYLDDEDHGDDDYDDDEEEPMP
RKVASRPPRKKRRWLGLFIKLFLVGAVVLAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMV
SLEPGMSYSKKEMIDLLEGMQYRQVTRMTRPGEFTVQGDSIDILRRPFDFPDAKEGQIRA
RLVFKNDSLAQIQNLDNQRDFGFLRLDPKLITMLQSPNGEQRLFVPRAGFPDLLVDTLLA
TEDRHFYEHDGISPYSIGRAMLANLTAGKAVQGGSTLTQQLVKNLFLTNERSLWRKANEA
YMALLVDYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVNELSLDQQAMLV
GMVKGASLYNPWRNPTLALERRNLVLRLLQNQGVIDAELYTMLSARPLGVQPKGGVITPQ
PAFMQMVRQELQQKLGDKINDLSGVKIFTTLDPVSQDAAEKAIEDGIPALKAARHLDDLE
AAMVIVDRFSGEVRAMVGGAQPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNT
WLADQPLSIKLPNGSSWQPKNYDRQFRGQVMLIDGLANSLNVPTVNLGMSVGLDQISAML
QRLGIPKNVINPVPAMLLGAIDLTPVEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQ
SFPQAERMVPAQAAYLTLYAMQQGVARGTSRSLSVKFSKYNLAAKTGTTNDLRDSWFAGI
DGKEVAIAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLVLQPPEGISQMNIDSAGN
FVCGDGGGMRSIPVWTENPQSLCQAAQPAGQAKPDGDGVAGWIKDMFGQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggatgaccgcgagccaatagggcgcaagggcaagaaagcccaacccaaagtc
gcatcaaaacggccattgcgccggcggcgtgatgaagatgaatacgaagaagaagactat
ttagatgatgaagaccacggcgatgatgattacgatgatgacgaggaagaaccgatgcca
agaaaggtagcatcacgtcccccgcgcaaaaaacgccgttggcttgggttattcatcaaa
ctgttcctggtgggcgcagtggtgttggcaatttatggggtttacctcgattcgcaaatc
cgcagccggattgatggcaaggtttggcaactgcccgccgccgtctatggccgcatggtg
agccttgaaccggggatgtcctacagcaagaaagaaatgatcgatttgctggaagggatg
caataccgccaggtcactcggatgactcgccctggcgagtttaccgtgcagggcgacagt
attgatatcttgcgccgcccatttgatttccctgacgcgaaagaaggtcaaatccgcgcg
cgtttggtgtttaaaaatgacagtttggcgcaaatccaaaacctggataatcagcgcgac
ttcggtttcctgcgtcttgatcccaagctgatcaccatgttgcaatctcctaatggtgag
cagcgcttgtttgtgccgcgtgctggcttccctgatttgctggtcgataccttgctggca
acagaagaccgccatttctatgagcatgacggcatcagcccgtattctattggccgcgcg
atgttggctaacctcactgctggtaaggcggtgcagggcggcagtaccttgacgcagcag
ttggttaaaaacctgttcctgactaacgagcgttcactgtggcgtaaagccaacgaggcc
tatatggccctgctggtagactaccgttacagcaaagatcggatactggaattgtatctg
aacgaagtgtatctcggccaaagcggcagtgaccaaattcgcggtttccctttggcgagc
ctgtattactttggtcgtccggtgaatgaactgagcctcgatcagcaagctatgctggtg
ggcatggtgaaaggagcgtcgctgtataacccatggcgtaacccgacactggcacttgag
cgccgcaatttggtgctgcgcttgttgcagaatcagggtgtgattgatgcagagctgtac
accatgctcagcgcccggccattgggcgtgcagccgaaaggcggggttatcacaccacag
ccagcatttatgcagatggtgcgtcaggagttacagcagaaactgggcgacaaaattaac
gatttgtccggtgtgaaaatcttcactacccttgatccggtttcacaggatgcggcagaa
aaagccatcgaagatggaattccggcactgaaagcggcgcgccatctggatgatttggaa
gcggcgatggtgattgtcgaccgtttcagtggtgaagttcgtgccatggtcgggggcgcg
cagccgcaatttgccggctttaaccgcgcaatgcaggctcgccgcttggtgggttcactc
gctaaaccaccgacctatctgactgccctgagtgagccggataaataccgccttaatacc
tggctggcggatcaaccgctgtcgattaaattgcccaacggctcatcatggcagccgaaa
aactatgatcgccagttccgtggtcaggtgatgctaattgatggtttggcgaactcgctg
aatgtgccgacggttaatctgggaatgtccgtcgggttggatcagataagcgccatgctg
caacgtttgggtattccgaaaaacgttatcaaccccgttccagcgatgttgctgggggcg
attgacttgaccccggttgaagtcgcgcaggaatatcagactatcgccagtggtgggaat
cgtgcgccattgtccgcagtgcgctcggtaattgctgaagatggcaccgtgctgtatcag
agcttcccgcaggcggagcgcatggtaccggcacaggcggcttatctgaccctttacgcc
atgcagcaaggggtcgcccgcgggacatcccgttcattatcagtgaaattctcaaaatac
aatctggctgccaaaaccggtaccaccaacgacctgcgcgatagctggtttgccggtatt
gatggcaaagaagtggcgattgcctgggtagggcgtgacaataacggcccggccaagttg
accggagctaacggcgcgctgactctgtatcgccgctatcttgagaatcaaaccccattg
ccgctggtattgcagccaccggaggggattagccagatgaatattgattcggctgggaat
tttgtctgtggtgatggcggcggtatgcgctcaatcccggtttggacagaaaacccgcaa
agcttgtgccaagctgctcaacctgcggggcaagctaaacctgatggcgatggcgtcgcg
ggttggatcaaagatatgtttggccagtaa
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