KEGG   Yersinia rochesterensis: CH54_29
Entry
CH54_29           CDS       T03609                                 
Symbol
cas3f
Name
(GenBank) CRISPR-associated helicase Cas3, subtype I-F/YPEST
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ykr  Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ykr02048]
    CH54_29 (cas3f)
Enzymes [BR:ykr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CH54_29 (cas3f)
Prokaryotic defense system [BR:ykr02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CH54_29 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3_HD DEAD Cas3-like_C ResIII LnmK_N_HDF
Other DBs
NCBI-ProteinID: AJJ34041
LinkDB
Position
27991..31263
AA seq 1090 aa
MNILLISQCNKRALGETRRILDQFAERKGDRTWQTAITAEGLNTLRKLLRKTARRNSAIA
CHWIKSNNQSELLWIVGNLRRFNIQGSVPTNSTQRNILRSQDENNWHSVESIALLAAVAG
LFHDFGKANVLFQKGLQGKGKSYQPYRHEWVSLRLFQAFVGQQNDIQWLTALSQINADDE
PRVIAHLVKDGIDLYKNPFMSLPPVATTVAWLIISHHRIPVYPKNNNYERPPKIEEMDDW
LHQQFMPEWNSTNMADNEWSEQDKRDQWHFPHGTPIQSAEWRKKAQKFARRALQQPALNN
YGQLSQRFTSHMARLVLMLADHHYSSLPPTIGWQDERYQAFANTDRQTKEMKQRLDEHNI
GVGQNALLLGRSLPNIRKTLPAITRHKGFKQRTTQERFRWQDKAYDLASILRERSQQQGF
FGINMASTGCGKTFANARIMYGLADEKQGCRFSVALGLRTLTLQTGDALRDKLTLETDDL
AVLIGSQSVTQLHQLNHDKDRPPGTGSESADAFFADHQYVSYDGSLDDGRLSAWLGKSDK
LNRLLSAPVLVCTIDHLIPATESLRGGKQIAPMLRLLTSDLVLDEPDDFDLNDLPALCRL
VNWAGMLGSRVLLSSATLPPALVQALFAAYGKGRADYQQACGQPNAPLNICCAWFDENDV
AQQDIQQPKDFTAAHADFVAQRVIKLSAARALRRAELIPISAVSTKKATVLDSMAAVMRD
SILRLHQQHHQTHPEGKTVSVGVVRMANINPLVAIALRLYATAAPENVRIHYCVYHSKHP
LAVRSAIEQRLDATLTRYQPDALWQVAEIKHALQHYPEQHHLFVVLATSVAEVGRDHDYD
WALAEPSSMRSLIQLAGRVQRHRQIAPQVANLHVLQKNYKALINIAPKKPVYLQPGFESS
DYLLNSHDLDKVLLPSQYEVINAVSRIQERAKLDHANNFVDLEHVSLRMLLQGGQNAKPK
YYAALWWRKQATWSGEQQRRTPFRQSATDEPHNLWLSDETDKPRFKRLDSDQIEWKDSDC
FRVVDLTVAAGNSPWIDTDCLRIYQQLAELLNKELSEVSRQFGEVRLCANKDDGEMWRYH
PLLGVFGALD
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgaatatcttattgatatcccaatgcaataaacgagcattaggagaaacccggcgtatt
ttggaccaatttgcggagcgcaaaggtgaccgcacatggcaaaccgccatcactgctgag
ggtttgaatacattacgcaaattactgcgcaaaacagcacggcgtaatagtgcgatcgcc
tgtcattggatcaaaagtaataatcaaagtgagctgttgtggattgtcggtaatttaagg
cgctttaatattcaaggttcggtgccgacgaatagcacgcaacggaatattttgcgcagc
caggatgaaaataattggcacagtgtggaaagtattgcactgctggccgcggttgccggg
ttatttcatgattttggcaaagccaatgtattatttcaaaaaggtctgcaaggtaaaggt
aaaagttatcagccctatcggcatgaatgggtgtcattgcggctatttcaggcctttgtg
gggcagcaaaatgatattcaatggctcactgcactgagccaaattaatgctgatgatgaa
ccccgcgtaatagctcatctggtgaaagatgggattgacctttataagaatccttttatg
agcttaccgccggtggccacgacagtggcctggctgattatctctcatcaccgaataccg
gtttatcccaaaaacaataattacgagcggccgcccaaaatagaagaaatggacgattgg
ttgcatcagcaatttatgccggaatggaattccaccaatatggccgataatgaatggagc
gagcaagataaacgagatcaatggcacttcccgcacggcaccccaatacagagtgccgag
tggcgtaaaaaggcacaaaaatttgcccgtcgggctttgcagcaaccggcattgaataat
tatggtcagttatcgcaacgatttaccagccatatggcgcgattggtattaatgctggcc
gaccatcattactcatcattgccgccaacaatcggctggcaagatgaacgctatcaggca
tttgccaatactgaccggcaaaccaaagaaatgaagcaacggctggatgagcataatatt
ggggtcggtcaaaatgcgctgttactgggcagaagtttgcccaatatcaggaaaaccttg
ccggcaatcacccgccataaagggtttaaacagcgcaccacacaagagcggttccgctgg
caagacaaagcctatgatttggcaagtattttgcgcgagcgttcgcaacagcaaggtttt
ttcggcattaacatggcctccaccggttgtggtaaaacctttgctaatgcacggattatg
tatggtttagccgatgaaaagcagggatgccgcttctccgtcgctttggggttgcgcacc
ttaaccttacaaaccggtgatgcattgcgggataaactcacactggaaacggatgacttg
gcagtattgattggctcacaatcggtcacacaattacatcaattaaatcacgataaagac
cggccacctggcaccggcagtgagtcggccgatgcattctttgctgatcatcagtatgtc
agttatgacggcagtctggatgatgggcgcttgagtgcctggctgggcaaaagtgataaa
ttaaaccgcttgctcagcgcgccggtgctggtttgtacgattgaccatttgatccccgcc
acggaaagtttgcgcggtggcaagcaaatagcgccgatgctgcgtttgctcacttcagat
ttggtgttggatgagccggatgactttgatctcaacgacttgcccgcattgtgccgtttg
gtcaactgggctggaatgctcggttcgcgcgttttgctctcttcggccacattgccgcca
gcattggttcaggcgctctttgctgcctatgggaaaggacgggcggattatcagcaagct
tgcgggcaacccaatgctccgctcaatatttgttgtgcctggtttgatgagaatgatgtc
gcgcagcaagatattcagcaacctaaggattttactgccgcccatgcagattttgtggct
cagcgagtcataaaactctcagccgcccgtgcgttacgtcgcgctgaattgatcccaatt
tctgcggtgagcaccaagaaagcgacggtgctggatagcatggcggcggtgatgcgcgat
tctatattgcggttacatcaacagcatcatcaaactcaccctgagggcaaaacagtgtca
gttggcgtggtcaggatggccaatatcaacccgctagtggcgattgccctgcgcctctat
gccacggcggcaccggaaaatgtccgcattcattattgcgtttatcacagcaagcacccg
ctcgcggtgcgctctgctattgaacagcggctggatgccaccttaacccgctatcagcca
gatgccctctggcaagtggctgaaatcaaacatgcattacagcattaccccgagcagcat
catctgtttgtggtgctcgccacctcggtggctgaagtggggcgcgaccacgattatgac
tgggcgctggccgaacccagctcaatgcgctcgttaattcaattggcggggcgggttcag
cgccaccggcaaatcgcgccgcaagtggcgaatctgcatgttttacaaaagaattataag
gcgctgattaatattgcccccaaaaaacccgtctatctccagcccggttttgaaagcagc
gactacttactgaatagccatgatttggacaaggtgctgttgccctctcagtatgaggtg
ataaatgccgttagccggattcaggagcgagccaagctggatcatgcgaataattttgtt
gatttagaacatgttagcttgagaatgctattgcagggcggtcaaaatgcgaagccaaaa
tactatgccgcattatggtggcgtaaacaggcgacctggagtggggaacagcaacggcgc
acccctttccggcaatccgctactgatgaaccgcataatctgtggctgagtgatgaaaca
gacaaaccgcgctttaaacggctggatagtgaccagattgaatggaaagacagtgactgt
tttcgggtggtggatctgactgtggcggcaggaaatagcccatggatagatacggattgc
ttgcggatttaccaacaactggccgagttactcaacaaggaattaagtgaggtcagccga
cagtttggtgaggttagactgtgcgcgaacaaagacgatggcgaaatgtggcgctatcat
ccgctattaggggtatttggcgcactcgattga

DBGET integrated database retrieval system