Yersinia massiliensis: DA391_14795
Help
Entry
DA391_14795 CDS
T05402
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
yma
Yersinia massiliensis
Pathway
yma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA391_14795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yma03400
]
DA391_14795
Enzymes [BR:
yma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DA391_14795
DNA repair and recombination proteins [BR:
yma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DA391_14795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AVX38831
UniProt:
A0A2R4NRS9
LinkDB
All DBs
Position
3165234..3166076
Genome browser
AA seq
280 aa
AA seq
DB search
MKFVGAHVSAAGGVDQAVIRAHEIKATAFALFTKNQRQWHAAPLTESVIEKFKQACEQYG
YTSAQILPHDSYLINLGHPVTEALEKSREAFIDEMLRCQQLGLSLLNFHPGSHLLQIDVD
KCLARIAESINIALDASEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEADCEHTFKQLGEIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDARFDNIPLILETVNPDIWAEEIAWLKSQTE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcggagcacacgttagtgccgcggggggagtcgatcaggcggtaattcga
gcgcatgagatcaaggcaaccgcctttgccttgtttaccaagaatcagcgccaatggcac
gcagccccgttgacagaaagtgtcatagagaagtttaagcaagcttgtgagcaatatggc
tacacatcggctcaaattttgcctcacgacagctatctgattaacttgggtcatccggtc
actgaagcgctagagaaatctcgtgaagcctttattgatgaaatgctccgctgccaacaa
ctggggttgtcattactgaacttccaccccggcagccatttactgcaaatcgatgtggat
aagtgtttagcgcggattgccgaatcaatcaatatcgcattagatgccagtgaaggtgtc
acggcggtgatcgaaaatactgccggccaagggagtaatctgggctttaagtttgaacat
ctggccgccatcattgacggcgtggaagataaaagccgtgtcggcgtgtgtattgatacc
tgccacgctttcgctgctggctatgatttgcgtactgaggccgattgcgagcacaccttc
aagcagctcggtgaaattgtcggtttccagtatttacgcggtatgcatctcaatgatgcg
aaaagtgaatttaatagccgagtggatcgccatcacagcctcggtgaagggaatatcggt
aaaaccgtgttcagctatattatgcgcgatgcgcgtttcgataatatcccgctcatccta
gaaaccgtcaatccagatatctgggccgaagaaattgcttggttgaagtcgcagacggaa
tag
DBGET
integrated database retrieval system