KEGG   Yersinia massiliensis: DA391_14795
Entry
DA391_14795       CDS       T05402                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
yma  Yersinia massiliensis
Pathway
yma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:yma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DA391_14795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yma03400]
    DA391_14795
Enzymes [BR:yma01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     DA391_14795
DNA repair and recombination proteins [BR:yma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DA391_14795
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AVX38831
UniProt: A0A2R4NRS9
LinkDB
Position
3165234..3166076
AA seq 280 aa
MKFVGAHVSAAGGVDQAVIRAHEIKATAFALFTKNQRQWHAAPLTESVIEKFKQACEQYG
YTSAQILPHDSYLINLGHPVTEALEKSREAFIDEMLRCQQLGLSLLNFHPGSHLLQIDVD
KCLARIAESINIALDASEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTEADCEHTFKQLGEIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDARFDNIPLILETVNPDIWAEEIAWLKSQTE
NT seq 843 nt   +upstreamnt  +downstreamnt
atgaaatttgtcggagcacacgttagtgccgcggggggagtcgatcaggcggtaattcga
gcgcatgagatcaaggcaaccgcctttgccttgtttaccaagaatcagcgccaatggcac
gcagccccgttgacagaaagtgtcatagagaagtttaagcaagcttgtgagcaatatggc
tacacatcggctcaaattttgcctcacgacagctatctgattaacttgggtcatccggtc
actgaagcgctagagaaatctcgtgaagcctttattgatgaaatgctccgctgccaacaa
ctggggttgtcattactgaacttccaccccggcagccatttactgcaaatcgatgtggat
aagtgtttagcgcggattgccgaatcaatcaatatcgcattagatgccagtgaaggtgtc
acggcggtgatcgaaaatactgccggccaagggagtaatctgggctttaagtttgaacat
ctggccgccatcattgacggcgtggaagataaaagccgtgtcggcgtgtgtattgatacc
tgccacgctttcgctgctggctatgatttgcgtactgaggccgattgcgagcacaccttc
aagcagctcggtgaaattgtcggtttccagtatttacgcggtatgcatctcaatgatgcg
aaaagtgaatttaatagccgagtggatcgccatcacagcctcggtgaagggaatatcggt
aaaaccgtgttcagctatattatgcgcgatgcgcgtttcgataatatcccgctcatccta
gaaaccgtcaatccagatatctgggccgaagaaattgcttggttgaagtcgcagacggaa
tag

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