Yersinia mollaretii: HRD69_09630
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Entry
HRD69_09630 CDS
T06716
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ymo
Yersinia mollaretii
Brite
KEGG Orthology (KO) [BR:
ymo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ymo03016
]
HRD69_09630 (truD)
Enzymes [BR:
ymo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HRD69_09630 (truD)
Transfer RNA biogenesis [BR:
ymo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HRD69_09630 (truD)
Prokaryotic type
HRD69_09630 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKJ03241
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All DBs
Position
2176867..2177916
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AA seq
349 aa
AA seq
DB search
MDMENLTWLHGKPKASGTLKANPEDFVVIEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLSTFELEGCEVLESVRQKRKL
RIGSLKGNAFTLVLRHITDNQDVEQRLQHIAAQGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSARLAQQQATTVLEGDALQLSGRGSWFVATADEL
AALQQRVDAGELNITAPLPGEGELGTQGEALAFELACLADQSELLALIKRERVEGARRAV
LLKPQNMAWSWWDDVTLELHFWLPAGSFATSVVREIMNQDNADAADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaaaatctcacttggctgcacggtaaacccaaggcgagcggcacgctaaag
gccaatccggaagacttcgtggtgatcgaagatctgggctttgagccggatggtgaaggc
gagcatctattggttcgtatccgcaaaaacggctgtaatacccagtttgtcgctgactat
ctggcgcgttttgccaagatacatccacggctggtgagctacgcgggcttgaaagatcgt
cacgccgtcaccgaacagtggttctgtttgcatctgccgggtaaagaagccccagatctc
tccaccttcgaactggaaggctgcgaagtgctggagtctgtgcgccaaaaaagaaaactg
cgcattggctcactgaagggcaacgcctttaccttggtattgcgccacatcacagataac
caagatgtagagcagcgattgcagcatattgcggcgcagggagtaccgaactattttggc
agtcaacgatttggtcgcggcggcaataatctggtgcaggcgcgcttgtgggcgaataac
gaaattcgagtcaaagagcgcagtaaacgcagcttttatctgtcggctagccgtagtgcc
atgttcaacctgattagtagtgcccgtttggcacaacagcaggcgacgacagtgctggaa
ggcgatgcattgcagctttctggtcgcggcagttggtttgttgccactgccgatgaactc
gccgcgctacagcaacgtgtcgatgcgggtgaacttaatatcactgccccgctgccgggg
gagggtgagctgggcactcagggtgaggcattggctttcgaactggcttgtttggcggat
caaagcgaattactggcgctgatcaagcgcgaacgagtcgaaggtgcacgtcgggccgta
ctgctgaaaccgcagaatatggcgtggagctggtgggatgatgtgaccctcgagctccac
ttctggttacctgccggcagctttgccaccagtgtggtgcgcgaaatcatgaatcaggat
aatgctgatgctgcggatattgctgagtaa
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