Yersinia pestis Harbin35: CH55_2239
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Entry
CH55_2239 CDS
T03717
Name
(GenBank) RNA pseudouridylate synthase family protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
ypj
Yersinia pestis Harbin35
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ypj03009
]
CH55_2239
03016 Transfer RNA biogenesis [BR:
ypj03016
]
CH55_2239
Enzymes [BR:
ypj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CH55_2239
5.4.99.29 23S rRNA pseudouridine746 synthase
CH55_2239
Ribosome biogenesis [BR:
ypj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH55_2239
Transfer RNA biogenesis [BR:
ypj03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CH55_2239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJK08866
UniProt:
A0A3G5LI88
LinkDB
All DBs
Position
complement(2405964..2406584)
Genome browser
AA seq
206 aa
AA seq
DB search
MIVLYQDKHIMVVNKPSGLLSVPGRAPENKDSVMTRVQNDFPTAESVHRLDMATSGVIVV
ALTKAAERELKRQFREREPKKTYIARVWGHLAQDEGLIDLPLICDWPNRPKQKVCYETGK
SAQTEYQVISRDDDGSTRVKLSPITGRSHQLRVHMLAMGHPILGDGFYAHPEAKAMASRL
QLHAQQLCITHPEFGTPMHFKCEAEF
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttttgtatcaagataagcacatcatggtcgtcaacaaacccagtgggttgctt
tccgtgccgggccgcgcaccagagaataaagacagcgtcatgacgcgtgttcagaatgat
tttcccaccgctgagtctgtgcatcggctagatatggcgaccagtggtgtgattgtggtt
gcattaaccaaagccgctgagcgtgagcttaagcgccagtttcgtgagcgtgaacccaag
aagacctatattgcacgggtttggggccatttagctcaggatgaagggctgattgattta
cccttaatttgtgactggccgaatcggccaaaacaaaaagtttgctatgaaaccggtaag
tctgcgcaaacagaataccaagtgatctcacgtgatgacgatggcagtaccagagtgaag
ctatcacccattacagggcgttcacatcaattacgggttcatatgttagccatggggcac
cctatcctcggtgatggtttctatgcccatccagaagccaaagcgatggcatcgcggctg
cagctacatgcacagcagttatgcattacccatccagagtttgggacaccaatgcatttc
aaatgtgaagcggaattttga
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