Yersinia pestis KIM10+ (biovar Mediaevalis): y2153
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Entry
y2153 CDS
T00092
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
y2153 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypk03400
]
y2153 (xthA)
Enzymes [BR:
ypk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
y2153 (xthA)
DNA repair and recombination proteins [BR:
ypk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
y2153 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AAM85715
UniProt:
Q8D0G5
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All DBs
Position
2381609..2382424
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AA seq
271 aa
AA seq
DB search
MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH
GQKGHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRD
HPIKFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKC
SFLPEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPL
AARCIATGIDYAIRGMEKPSDHAPVWSEFSL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccatgaagttcgtttcttttaatatcaatggcctacgtgctcgtcctcatcaa
ttagccgcaataattgagcagcatcaaccggatgtgatcggcctacaagaaactaaggta
catgatgatatgtttcctcttgaagacgtcagccagcatggttaccacgttttttaccat
gggcaaaaaggtcattacggtgttgcactattgacgaaagaacagccactggctgtgcgc
cgaggtttcccaagcgatgaagaagatgcacagcgccgtattatcatggccgacttagcc
accccgcaaggcaccttaacggtaatcaatggttattttcctcagggagaaagtcgtgac
catccaataaagttccccgctaaagcgcgcttttatgctgacctgcaacgctatcttgag
gagcaactctcccctgaggcccaggtacttatcatgggggacttgaatatcagtccaacc
gatttagatatcggtattggtgaagataaccgtaaacgctggctgcgcacaggcaaatgc
tcgttcttaccagaagaacgagagtggctggaacgtctgcaaaactgggggttggttgat
actttccgcgcggctaatcctgattgtaatgaccatttttcatggtttgattaccgttcc
cgtggttttgatgaaaacagaggccttcgcatcgatttattgctggccagtcaaccactg
gcggctcgttgtattgctacaggtattgattatgcaatccgtgggatggaaaaaccatca
gaccacgcgccggtttggtccgaattctcactttaa
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