Yersinia pseudotuberculosis IP 32953 (serotype 1): BZ17_1823
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Entry
BZ17_1823 CDS
T03832
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ypo
Yersinia pseudotuberculosis IP 32953 (serotype 1)
Pathway
ypo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ypo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZ17_1823 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypo03019
]
BZ17_1823 (pcnB)
Enzymes [BR:
ypo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BZ17_1823 (pcnB)
Messenger RNA biogenesis [BR:
ypo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BZ17_1823 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJJ54719
UniProt:
Q66EG1
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All DBs
Position
2017592..2018905
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AA seq
437 aa
AA seq
DB search
MAIIPRDQHNISRRDISDNALKVLYRLNKSGYEAYLVGGGVRDLLLGRKPKDFDITTSAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQQAEDSDKNSSQQAQNGML
LRDNIFGSIEDDAQRRDFTINSLYYGISDFALRDYTGGLRDLKEGIIRLIGDPETRYRED
PVRMLRAVRFAAKLDMSISPETAEPIPRLASLLREIPPARLFEESLKLLQSGYGYKTYLK
LCEYQLFQPLFPLIARNFTEQHDSPMERILVQVLKNTDHRLHNDQRVNPAFLFAAMLWYP
LIEHAQKLTQESGLAYYDAFALAMNDVLDEECRSLAIPKRITSLVRDIWLLQLRLSRRQG
KRAHKLMEHPKFRAAYDLLLLRAEVEKNHELQRLAQWWGEFQEATPTQQKSMLNTLGADP
APRRSRPRRPRKPVPRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgattattccgcgggatcagcacaatatctcccgcagagatatcagtgacaatgca
ctgaaggttctctatcgcctgaataaatcaggttacgaagcttatctggtgggcggcggt
gtccgcgacctgctgctgggcagaaaacccaaagatttcgatatcaccaccagcgccacc
cctgaacaggtgcgaaaactgttccgtaactgtcgtttggttggtcgccgcttccgtttg
gctcatgtgatgtttggccctgaaattattgaagtagcgactttccgtggccaccacgag
cagcaacaagcagaagacagcgataagaactcctcccagcaggcgcaaaatggcatgttg
ctgcgtgacaacatctttggctccatcgaagatgatgctcaacgccgtgatttcaccatt
aacagcctctactacggtatttctgattttgcgctgcgtgactacaccggcggcttacgt
gatctgaaagagggtattattcgtctaattggcgacccagaaacccgttaccgtgaagat
ccggtacggatgctgcgtgcggttcgttttgccgcaaaactggatatgtcaatcagcccg
gaaacggcagagcctataccgcgtctggcctcactgttgcgcgaaatcccgcccgcccgc
ctgtttgaggagtcactcaagctgctgcaatccggctacggctataaaacctatttaaaa
ctgtgcgaataccagcttttccagccgctattcccactgattgcccgtaattttactgaa
cagcatgattcgccaatggagcgtattctggttcaggtactgaaaaataccgaccaccgt
ctgcataatgatcagcgggttaatcctgccttcttatttgcggcgatgctgtggtatccg
ctgattgaacatgcgcagaagttaacgcaggaaagcggtctggcctattacgatgcattt
gcattggccatgaatgatgtgctggacgaagagtgccgctcactggctatccctaaacgt
atcacctcactggtacgggatatctggttgttacaactgcgtctgtcacgtcgtcagggg
aaacgtgcccataagctgatggaacaccctaaattccgggcggcttacgatctgttactc
ctacgggcagaagtggaaaaaaatcacgagctgcaacgtttggcgcagtggtggggcgaa
ttccaggaagccactcccacgcaacagaaatccatgctgaatacattaggtgctgatcct
gcgccacggcgttcacgtccacgccgcccacgcaagccagtaccccgggtataa
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