Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_1872
Help
Entry
YPDSF_1872 CDS
T00505
Name
(GenBank) quorum-sensing transcriptional activator YpeR
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YPDSF_1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypp03000
]
YPDSF_1872
Transcription factors [BR:
ypp03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
YPDSF_1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABP40257
LinkDB
All DBs
Position
complement(2107062..2107799)
Genome browser
AA seq
245 aa
AA seq
DB search
MIINFFDNESINEDIKNYIQRRIKAYGNIRYSYLLMNKKVPLHPAIISNYPLDWVKKYKK
NSYHLIDPVILTAKGKVAPFAWDDNSVINIKSTDSAVFNLAREYNIVNGYTFVLHDNNNN
MATLNVSSGDDDSIFFDESIEVNKEKIQMLLIFIHDKMLGLYNKSHHENNTLNKKENKRE
IFSPRENEILYWASVGKTYSEIAIILGIKKSTVKFHIGNIVRKLGVLNAKHAIRLGIELQ
LIKPI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatttttttgataatgaaagcattaatgaagatataaaaaattatatccaa
cggaggataaaagcctatggcaatatccgctattcttatttgctaatgaataaaaaagta
ccgctacatccggcgatcatatcgaactacccgctagactgggtaaaaaagtacaagaag
aatagttatcacctgatcgaccctgtgattttgaccgccaaaggcaaagtcgcaccattt
gcatgggatgacaattcagtcatcaatataaaatcaactgattcggccgtgttcaatctc
gccagagaatataatattgttaatggttataccttcgttcttcatgataataacaataat
atggcgaccttgaatgtttcaagtggcgatgatgatagtatttttttcgatgaaagcatc
gaggtgaacaaagaaaaaatacaaatgttacttatttttattcacgataaaatgcttggt
ctatataataaaagtcatcatgaaaacaacacgttgaataaaaaagagaataaaagagaa
attttctctcctcgggaaaatgaaattctgtactgggccagtgtaggaaagacttactct
gaaattgcgataattttaggtattaagaaaagcacagtgaaatttcatattggtaatatt
gttaggaagttaggtgttctcaatgccaaacatgcaataagacttggcattgagttacaa
ttgatcaaacctatttag
DBGET
integrated database retrieval system
