Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_3013
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Entry
YPDSF_3013 CDS
T00505
Name
(GenBank) transcriptional regulatory protein
Organism
ypp
Yersinia pestis Pestoides F (biovar Antiqua)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
HTH_28
Sigma70_r4
HTH_Crp_2
HTH_23
Sigma70_r4_2
GntR
HTH_24
HTH_29
TrmB
MarR_2
UPF0175
Motif
Other DBs
NCBI-ProteinID:
ABP41373
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Position
complement(3418991..3419962)
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AA seq
323 aa
AA seq
DB search
MEKQMIPQDNELLTEIAVSYYQDEMTQEEIAHKFGISRIKVGRLLKRAKTEGIVEINVRY
HPVFSTRLEQQLIEHFGLKRALIALDYQDEDEQRRQVAALVSAYLATNLKDNTVLAVGQG
RNVAAIADHVSVVPERHCKFICGIGGTHRPGDAINADHISRRLAKKFGGTSETLYAPAYV
ENRALKEAFMQNGTIKETLDRARKADMALVGIGDMNENSYMVELGWFTPQEIVDASLHQG
VTGEIAGYDFFDAQGQPANTVMNDRVIGISTQELRQIPCVIAIAAENTKALALLGALRTG
AIDILATSASNARTILKMIQHQS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagatgatcccacaagacaatgagttgttaactgaaattgctgtttcgtat
tatcaggatgaaatgactcaggaagaaatcgcccataaatttggcatttcaaggatcaaa
gtcggtcgcttgctgaaacgcgcgaaaacagagggcatcgttgagattaacgttcgttat
catccggtattcagtacccgccttgagcaacagttaatcgagcattttgggttgaaacgg
gcgctgatagcccttgattaccaagatgaggatgaacaacgccgccaggtcgccgcgttg
gtttcagcctacttagccacaaacttaaaagacaacacggtgttggccgttggccagggg
cgtaatgttgcggctatcgcagaccacgtcagcgtcgtgccagaaaggcactgtaagttt
atctgtggcatcggtggaacacaccgcccaggtgatgcgattaatgccgatcacatcagt
cgccgcttagccaaaaaatttggcggaacgagtgaaaccctgtacgcacccgcgtatgtg
gaaaaccgggcgctaaaagaagcctttatgcaaaacggtaccattaaagagactctggac
cgcgcccgtaaggctgatatggctctggttggcatcggtgatatgaacgaaaacagctat
atggtagagctgggctggttcactcctcaggagatcgtcgacgccagtctgcatcaaggt
gtgacaggcgaaattgcgggatatgatttttttgatgcgcaaggccagcccgcgaatacg
gtgatgaatgatcgggttattggtatcagcacccaagagcttcgccagatcccctgcgtt
atcgctatcgccgctgaaaacaccaaagcattagcgctgctgggtgccttgcgtaccggt
gcgatcgatattcttgcgaccagtgcatccaatgcccggactattttgaagatgattcaa
catcagtcgtaa
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