Yersinia pseudotuberculosis ATCC 6904: DJ40_4044
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Entry
DJ40_4044 CDS
T03307
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
ypq
Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ypq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DJ40_4044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ypq03000
]
DJ40_4044
Transcription factors [BR:
ypq03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
DJ40_4044
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AIN16141
UniProt:
A0A3G5IZU6
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All DBs
Position
4549412..4550149
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AA seq
245 aa
AA seq
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MIINFFDNESINEDIKNYIQRRIKAYGNIRYSYLLMNKKVPLHPAIISNYPLDWVKKYKK
NSYHLIDPVILTAKGKVAPFAWDDNSVINIKSTDSAVFNLAREYNIVNGYTFVLHDNNNN
MATLNVSSGDDDSIFFDESIEVNKEKIQMLLIFIHDKMLGLYNKSHHENNTLNKKENKRE
IFSPRENEILYWASVGKTYSEIAIILGIKKSTVKFHIGNIVRKLGVLNAKHAIRLGIELQ
LIKPI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatttttttgataatgaaagcattaatgaagatataaaaaattatatccaa
cggaggataaaagcctatggcaatatccgctattcttatttgctaatgaataaaaaagta
ccgctacatccggcgatcatatcgaactacccactagactgggtaaaaaagtacaagaag
aatagttatcacctgatcgaccctgtgattttgaccgccaaaggcaaagtcgcgccattt
gcatgggatgacaattcagtcatcaatataaaatcaactgattcagccgtgttcaatctc
gccagagaatataatattgttaatggttataccttcgttcttcatgataataacaataat
atggcgaccttgaatgtttcaagtggcgatgatgatagtatttttttcgatgaaagcatc
gaggtgaacaaagaaaaaatacaaatgttacttatttttattcacgataaaatgcttggt
ctatataataaaagtcatcatgaaaacaacacgttgaataaaaaagagaataaaagagaa
attttctctcctcgggaaaatgaaattctgtactgggccagtgtaggaaagacttactct
gaaattgcgataattttaggtattaagaaaagcacagtgaaatttcatattggtaatatt
gttaggaagttaggtgttctcaatgccaaacatgcaataagacttggcattgagttacaa
ttgatcaaacctatttag
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